Gene Information

Name : sycT (YP_pCD66)
Accession : NP_995390.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Virulence
Product : putative yopT chaperone SycT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46757 - 47155 bp
Length : 399 bp
Strand : -
Note : Best Blastp hit =gi|16082710|ref|NP_395156.1| (NC_003131) putative yopT chaperone (132 aa) [Yersinia pestis] gi|11354338|pir||T42900 YopT chaperone - Yersinia pestis plasmid pCD1, gi|3822112|gb|AAC69832.1| (AF074612) YopT chaperone [Yersinia pestis], gi|5

DNA sequence :

ATGCAGACAACCTTCACAGAACTTATGCAACAGCTTTTCCTGAAGCTTGGCTTGAACCATCAAGTTAATGAAAATGACGT
TTATACATTTACATTTGAAGTGGATGGGCACATCCAAGTACTGATTGCTTGTTATCATCAACAATGGGTACAGTTGTTCA
GTGAGCTAGGTGCTGATTTGCCAACCAACGATAATTTGTTTGGCGAACATTGGCCTGCCCATGTTCAAGGAAGACTGGAC
GGTAAACCTATTCTCTGGTCTCAACAATCACTGGTAGGGTTGGATATCGATGAAATGCAGGCTTGGTTAGAACGTTTCAT
TGATGATATTGAGCAGAGAAAAGAACCGCAAAATACTAAGTTTCAGCCCAACTCGACATCACCCATATTATTCATCTGA

Protein sequence :

MQTTFTELMQQLFLKLGLNHQVNENDVYTFTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLD
GKPILWSQQSLVGLDIDEMQAWLERFIDDIEQRKEPQNTKFQPNSTSPILFI

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAO18077.1	unknown	Not tested	TTSS locus	Protein	2e-33	55

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sycT	NP_995390.1	putative yopT chaperone SycT	VFG0376	Protein	4e-58	100