Gene Information

Name : lcrV (YP_pCD52)
Accession : NP_995380.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Virulence
Product : V antigen LcrV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 37960 - 38934 bp
Length : 975 bp
Strand : +
Note : Best Blastp hit = gi|7578513|gb|AAF64076.1|AF167309_1 (AF167309) V antigen [Yersinia pestis] ;. Contains Low calcium response V antigen (Interpro|IPR005413, Cellular Component: extracellular (GO:0005576), Biological Process: pathogenesis (GO:0009405))

DNA sequence : 
ATGATTAGAGCCTACGAACAAAACCCACAACATTTTATTGAGGATCTAGAAAAAGTTAGGGTGGAACAACTTACTGGTCA
TGGTTCTTCAGTTTTAGAAGAATTGGTTCAGTTAGTCAAAGATAAAAATATAGATATTTCCATTAAATATGATCCCAGAA
AAGATTCGGAGGTTTTTGCCAATAGAGTAATTACTGATGATATCGAATTGCTCAAGAAAATCCTAGCTTATTTTCTACCC
GAGGATGCCATTCTTAAAGGCGGTCATTATGACAACCAACTGCAAAATGGCATCAAGCGAGTAAAAGAGTTCCTTGAATC
ATCGCCGAATACACAATGGGAATTGCGGGCGTTCATGGCAGTAATGCATTTCTCTTTAACCGCCGATCGTATCGATGATG
ATATTTTGAAAGTGATTGTTGATTCAATGAATCATCATGGTGATGCCCGTAGCAAGTTGCGTGAAGAATTAGCTGAGCTT
ACCGCCGAATTAAAGATTTATTCAGTTATTCAAGCCGAAATTAATAAGCATCTGTCTAGTAGTGGCACCATAAATATCCA
TGATAAATCCATTAATCTCATGGATAAAAATTTATATGGTTATACAGATGAAGAGATTTTTAAAGCCAGCGCAGAGTACA
AAATTCTCGAGAAAATGCCTCAAACCACCATTCAGGTGGATGGGAGCGAGAAAAAAATAGTCTCGATAAAGGACTTTCTT
GGAAGTGAGAATAAAAGAACCGGGGCGTTGGGTAATCTGAAAAACTCATACTCTTATAATAAAGATAATAATGAATTATC
TCACTTTGCCACCACCTGCTCGGATAAGTCCAGGCCGCTCAACGACTTGGTTAGCCAAAAAACAACTCAGCTGTCTGATA
TTACATCACGTTTTAATTCAGCTATTGAAGCACTGAACCGTTTCATTCAGAAATATGATTCAGTGATGCAACGTCTGCTA
GATGACACGAGGTAA

Protein sequence : 
MIRAYEQNPQHFIEDLEKVRVEQLTGHGSSVLEELVQLVKDKNIDISIKYDPRKDSEVFANRVITDDIELLKKILAYFLP
EDAILKGGHYDNQLQNGIKRVKEFLESSPNTQWELRAFMAVMHFSLTADRIDDDILKVIVDSMNHHGDARSKLREELAEL
TAELKIYSVIQAEINKHLSSSGTINIHDKSINLMDKNLYGYTDEEIFKASAEYKILEKMPQTTIQVDGSEKKIVSIKDFL
GSENKRTGALGNLKNSYSYNKDNNELSHFATTCSDKSRPLNDLVSQKTTQLSDITSRFNSAIEALNRFIQKYDSVMQRLL
DDTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssV AAO18053.1 LssV Virulence TTSS locus Protein 2e-73 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lcrV NP_995380.1 V antigen LcrV VFG0381 Protein 3e-142 100
lcrV NP_995380.1 V antigen LcrV VFG0201 Protein 7e-39 46