Gene Information

Name : yscY (YP_pCD48)
Accession : NP_995376.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Virulence
Product : putative type III secretion protein YscY
Function : -
COG functional category : R : General function prediction only
COG ID : COG4783
EC number : -
Position : 34747 - 35091 bp
Length : 345 bp
Strand : +
Note : Best Blastp hit =gi|10955555|ref|NP_052396.1| (NC_002120) YscY (114 aa) [Yersinia enterocolitica] gi|16082723|ref|NP_395169.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|140992|sp|P21209|Y6D5_Y ERPE Hypothetical protein YPCD1.35c

DNA sequence : 
ATGAATATTACTTTAACCAAACGACAACAGGAGTTCTTGCTGCTCAACGGTTGGTTACAACTACAATGTGGCCATGCAGA
GCGCGCATGTATTCTATTGGACGCCTTGCTGACGTTAAATCCTGAGCATTTAGCCGGTCGGCGTTGCCGATTAGTCGCGC
TACTTAATAATAACCAGGGAGAACGTGCCGAAAAAGAAGCGCAATGGCTAATATCACATGACCCTTTACAGGCTGGGAAT
TGGCTCTGTTTGAGCCGCGCCCAACAACTGAACGGCGATCTTGATAAGGCTCGCCATGCTTATCAACATTATTTGGAGTT
GAAAGATCATAATGAATCCCCATGA

Protein sequence : 
MNITLTKRQQEFLLLNGWLQLQCGHAERACILLDALLTLNPEHLAGRRCRLVALLNNNQGERAEKEAQWLISHDPLQAGN
WLCLSRAQQLNGDLDKARHAYQHYLELKDHNESP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssC AAO18049.1 LssC Virulence TTSS locus Protein 9e-13 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscY NP_995376.1 putative type III secretion protein YscY VFG0385 Protein 3e-47 100
yscY NP_995376.1 putative type III secretion protein YscY VFG0197 Protein 9e-05 46