Gene Information

Name : yopN (YP_pCD44)
Accession : NP_995372.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Virulence
Product : putative membrane-bound Yop targeting protein YopN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32887 - 33768 bp
Length : 882 bp
Strand : +
Note : Best Blastp hit =gi|16082727|ref|NP_395173.1| (NC_003131) putative membrane-bound Yop targeting protein (293 aa) [Yersinia pestis], gi|126023|sp|P16160|yopN_YERP E Outer membrane protein yopN (Yop4b) (LcrE), gi|97012|pir|| S15320 yopN protein - Yersinia p

DNA sequence : 
ATGACGACGCTTCATAACCTATCTTATGGCAATACCCCGCTGCATAATGAGCGTCCAGAGATTGCCAGTAGTCAGATCGT
AAATCAGACTCTGGGTCAATTTCGGGGAGAATCTGTGCAGATAGTCAGCGGCACTCTGCAGTCTATAGCTGATATGGCAG
AAGAGGTAACATTTGTCTTCTCCGAGCGTAAGGAGTTCTCCCTCGACAAACGCAAATTAAGTGACAGCCAGGCTCGAGTT
AGCGACGTTGAGGAGCAGGTTAATCAATACCTTAGCAAAGTTCCAGAGTTGGAACAAAAACAGAATGTGAGTGAGCTGCT
CAGTCTGTTGAGTAACAGCCCCAATATAAGCTTGTCCCAGTTAAAGGCTTATCTGGAGGGGAAATCAGAAGAACCGAGTG
AGCAATTCAAAATGCTCTGCGGCTTGCGTGATGCCCTGAAAGGGCGCCCTGAATTAGCACATCTTTCGCATTTGGTTGAA
CAAGCTCTGGTCAGCATGGCTGAAGAGCAAGGAGAAACCATTGTATTGGGTGCCAGGATAACCCCGGAAGCGTACAGAGA
ATCCCAGTCGGGTGTTAATCCACTGCAGCCGCTCCGTGATACCTACCGCGATGCAGTGATGGGTTATCAAGGAATTTATG
CGATCTGGAGTGATTTACAAAAACGTTTTCCTAATGGGGATATAGACTCGGTGATATTATTCCTGCAAAAGGCGCTTAGT
GCAGATCTACAAAGTCAACAAAGCGGGTCTGGACGGGAAAAATTAGGAATAGTTATTAGTGACTTACAGAAGCTAAAGGA
GTTTGGTAGCGTGAGTGACCAAGTTAAAGGATTTTGGCAATTTTTTTCAGAGGGTAAAACTAATGGCGTACGACCTTTCT
GA

Protein sequence : 
MTTLHNLSYGNTPLHNERPEIASSQIVNQTLGQFRGESVQIVSGTLQSIADMAEEVTFVFSERKEFSLDKRKLSDSQARV
SDVEEQVNQYLSKVPELEQKQNVSELLSLLSNSPNISLSQLKAYLEGKSEEPSEQFKMLCGLRDALKGRPELAHLSHLVE
QALVSMAEEQGETIVLGARITPEAYRESQSGVNPLQPLRDTYRDAVMGYQGIYAIWSDLQKRFPNGDIDSVILFLQKALS
ADLQSQQSGSGREKLGIVISDLQKLKEFGSVSDQVKGFWQFFSEGKTNGVRPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 6e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yopN NP_995372.1 putative membrane-bound Yop targeting protein YopN VFG0389 Protein 1e-123 99
yopN NP_995372.1 putative membrane-bound Yop targeting protein YopN VFG0193 Protein 5e-50 48