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Name : yscU (YP_pCD36) Accession : NP_995364.1 Strain : Genome accession: NC_005813 Putative virulence/resistance : Virulence Product : putative type III secretion protein YscU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 25858 - 26922 bp Length : 1065 bp Strand : - Note : Best Blastp hit =gi|16082735|ref|NP_395181.1| (NC_003131) putative type III secretion protein [Yersinia pestis] gi|732269|sp|P40300|yscU_YERPE Yop proteins translocation protein U, gi|11279821|pir||T43578 type III secretion protein yscU - Yersinia pestis DNA sequence : ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA GGAAGTGGTCTCTACTGCGCTTATCGTCGCGCTGAGTGCGATGTTAATGGGGCTTTCTGACTACTATTTCGAGCATTTTA GTAAGCTGATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTGGCGGCATTAATGGCGATCGCATCTCATGTTGTGCAGTATGG TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGTATCTTTTCCA TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA AATCTAGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT GATGGTTATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCCGACTATGCCTTTGAATACTATCAATATATTAAGGAAC TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGTCGTCAG TTTCATCAAGAGATCCAATCGAGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT TGCTATTGGTATTCTTTACAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA GAAACAACATTCCGAAATGTTATAA Protein sequence : MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHFSKLMLIPAEQSYLPFSQALSYVVDNVL LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ FHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 2e-115 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscU | NP_995364.1 | putative type III secretion protein YscU | VFG0397 | Protein | 8e-157 | 100 |
| yscU | NP_995364.1 | putative type III secretion protein YscU | VFG0185 | Protein | 3e-96 | 67 |
