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Name : yscC (YP_pCD31) Accession : NP_995359.1 Strain : Genome accession: NC_005813 Putative virulence/resistance : Virulence Product : putative type III secretion protein YscC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 21303 - 23126 bp Length : 1824 bp Strand : - Note : Best Blastp hit =gi|16082740|ref| NP_395186.1| (NC_003131) putative type III secretion protein [Yersinia pestis], gi|11354329|pir||T43573 type III secret ion protein yscC - Yersinia pestis plasmid pCD1, gi|155446|g b|AAA27638.1| (M83225) KIM5 [Yersinia pe DNA sequence : ATGGCTTTTCCGCTACATTCTTTTTTCAAGCGCGTACTCACCGGGACGTTACTGTTACTTTCTAACTATAGCTGGGCGCA AGAACTTGATTGGTTGCCTATACCTTATGTTTATGTGGCGAAGGGGGAAAGTTTACGCGATTTATTAATTGATTTCAGCG CTAATTATGATGCTACAGTGGTAGTAAGCGATAAGATTAATGACAAAGTTTCCGGCCAGTTTGAGCATGATAACCCTCAG GATTTCCTACAGCATATTGCCTCCCTTTACAATTTGGTTTGGTACTATGATGGCAATGTGCTCTACATTTTTAAAAATAG TGAGGTAGCGTCTCGTCTCATTCGTTTACAGGAAAGTGAGGCCGCAGAGTTAAAGCTGGCATTACAACGTTCTGGTATAT GGGAGCCTCGTTTTGGCTGGCGCCCTGATGCTAGCAACCGCCTTGTTTACGTCTCTGGTCCTCCTCGTTATCTTGAATTG GTTGAACAGACCGCAGCCGCATTGGAACAACAGACGCAAATTCGCAGTGAAAAAACAGGGGCATTAGCGATTGAGATTTT CCCTCTCAAATATGCATCAGCGAGCGATCGAACTATTCATTACCGTGATGACGAAGTGGCTGCTCCTGGGGTTGCAACGA TACTTCAACGCGTGTTAAGCGATGCCACAATCCAACAAGTGACAGTGGATAATCAGAGAATACCGCAGGCCGCTACCCGG GCTTCAGCTCAAGCCAAGGTTGAAGCGGATCCATCGCTCAATGCGATAATAGTGCGCGATTCTCCTGAGCGTATGCCAAT GTATCAACGGTTAATTCATGCGCTTGATAAACCTAGCGCTCGTATTGAAGTGGCGTTATCCATTGTCGATATAAATGCCG ACCAACTTACTGAATTAGGTGTGGACTGGCGAGTTGGCATTCGTACTGGCAACAATCATCAGGTGGTAATAAAAACAACC GGGGATCAAAGTAACATCGCTTCAAACGGTGCATTGGGTAGTTTGATTGATGCTCGCGGGCTTGACTACCTATTAGCAAG AGTCAATTTACTTGAAAATGAAGGTTCGGCTCAAGTTGTTTCACGTCCGACCCTGCTAACACAAGAAAATGCCCAAGCGG TGATTGATCACCATGAAACCTATTACGTCAAAGTGACAGGTAAAGAAGTGGCTGAACTGAAAGGGATCACCTACGGCACT ATGCTGCGTATGACACCAAGGGTGCTGACTCAAGGAGATAAGTCAGAAATCAGTCTCAATCTACACATTGAGGATGGGAA CCAAAAACCGAATAGTTCAGGGATTGACGGAATCCCCACTATCAGTCGTACGGTCGTTGATACTGTCGCTCGCGTGGGAC ATGGCCAGAGTTTGATTATTGGTGGTATTTATCGTGACGAATTGAGTGTTGCTCTTAGTAAGGTGCCTTTGCTTGGTGAT ATTCCTTATCTTGGCGCACTTTTCCGCCGTAAAAGTGAGTTAACTCGCCGTACGGTACGGCTGTTTATCATCGAACCACG GATTATTGACGAAGGTATTGCGCATCATTTAGCGTTAGGTAATGGTCGGGATCTACGTACTGGTATCTTAGCTGTTGATG AAATATCTAATCAAAGCACTACCTTGAATAAGTTATTAGGTGGCTTCCAGTGTCAGCCTTTAAACAAAGCGCAAGAAGTG CAGAAATGGCTGAGTCAAAACAATAAATCATCCTATCTTACTCAGTGCAAGATGGACAAAAGTTTGGGATGGCGCGTGGT TGAAGGTGCTTGTACTCCCGCGGAATCATGGTGTGTTTCAGCGCCTAAGCGTGGCGTATTGTGA Protein sequence : MAFPLHSFFKRVLTGTLLLLSNYSWAQELDWLPIPYVYVAKGESLRDLLIDFSANYDATVVVSDKINDKVSGQFEHDNPQ DFLQHIASLYNLVWYYDGNVLYIFKNSEVASRLIRLQESEAAELKLALQRSGIWEPRFGWRPDASNRLVYVSGPPRYLEL VEQTAAALEQQTQIRSEKTGALAIEIFPLKYASASDRTIHYRDDEVAAPGVATILQRVLSDATIQQVTVDNQRIPQAATR ASAQAKVEADPSLNAIIVRDSPERMPMYQRLIHALDKPSARIEVALSIVDINADQLTELGVDWRVGIRTGNNHQVVIKTT GDQSNIASNGALGSLIDARGLDYLLARVNLLENEGSAQVVSRPTLLTQENAQAVIDHHETYYVKVTGKEVAELKGITYGT MLRMTPRVLTQGDKSEISLNLHIEDGNQKPNSSGIDGIPTISRTVVDTVARVGHGQSLIIGGIYRDELSVALSKVPLLGD IPYLGALFRRKSELTRRTVRLFIIEPRIIDEGIAHHLALGNGRDLRTGILAVDEISNQSTTLNKLLGGFQCQPLNKAQEV QKWLSQNNKSSYLTQCKMDKSLGWRVVEGACTPAESWCVSAPKRGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscC | NP_995359.1 | putative type III secretion protein YscC | VFG0402 | Protein | 0.0 | 100 |
| yscC | NP_995359.1 | putative type III secretion protein YscC | VFG0211 | Protein | 0.0 | 64 |
