Gene Information

Name : ORFA (YP_pCD20)
Accession : NP_995348.1
Strain :
Genome accession: NC_005813
Putative virulence/resistance : Unknown
Product : putative transposase ORFA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 15028 - 15294 bp
Length : 267 bp
Strand : -
Note : Best Blastp hit =gi|16082751|ref|NP_395197.1| (NC_003131) putative transposase ORFA [Yersini a pestis] gi|400176|sp|Q00931|LCRS_YERPE Low calcium response locus protein S, gi|11354319|pir||T43562 probable IS element protein - Yersinia pestis plasmid pCD1,

DNA sequence :
ATGAAGAAAGCACGTTTTACTGAAACTCAGATCCTGCGGGTTCTAAAAGAAGTTGAAGGTGGCCGGCATGTGAAGGATGT
CTGTCGCGAGAACGGCGGATCTGAAGCCAGTTACTACAACTGGAAATCCAAATATGGTGGCATGGAGTCCTCTGATATAA
AGCGAATGAAAGAGCGGGAAGAGGAAAACCGACGATTAAAGCAGATGTATGCCTCTCTGAGTTTAGATCATGAAATTCTT
AAGGATGTCGTGGCAAAAAAACTTTAA

Protein sequence :
MKKARFTETQILRVLKEVEGGRHVKDVCRENGGSEASYYNWKSKYGGMESSDIKRMKEREEENRRLKQMYASLSLDHEIL
KDVVAKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-20 70
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-14 55
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-14 55
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 6e-11 53
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 6e-11 53
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-10 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 9e-11 52