Name : fliR1 (YP_0427) Accession : NP_991821.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 451340 - 452134 bp Length : 795 bp Strand : + Note : highly similar to Yersinia pestis CO92 YPO0272 and Yersinia pestis KIM y0532. Contains Bacterial export protein, family 1 (Interpro|IPR002010, (GO:0016020)). Contains Type III secretion protein SpaR/YscT (Interpro|IPR006304) DNA sequence : ATGACTGACGTCCTCCCCGGTCTAACCGCACTCGCATTAGCCATGATGCGGCCCTACGGTATCTTACTGATATTACCGCT GTTTACCGCCCGCAGTTTGGGGAGCAGCTTATTGCGTAATGGCTTGATTGTTGCCATCGCGCTGCCGGTCACGCCGCTAT TTTTATCCGCACCCATCATCACCAATAGTAGCCCGGTCACCTGGATTGGGGTGTTATGCACGGAGCTACTCATTGGGGTG GTGATGGGGTTTGTCGCCGCATTGCCTTTCTGGGCTATGAATATGGCGGGTTTCCTGATCGATACTTTACGGGGGGCAAC GATGTCCACGTTGTTTAACCCCGGTATGGGCGTCGAATCCTCCCTTTTTGGTGTGCTGTTTACCCAAATATTAACGGTAC TGTTCCTGATTTCTGGCGGTTTTAATCAGGTGTTGGCGGCGTTGTACGGCTCGTACGATAGCTTACCCATCGGCCAGGGT ATCCAGCCTGCTGCAGATCTATTGCTCTTTCTGCAAACTGAGTGGCAGATGATGTTCGAGCTTTGCTTGTGCTTTGCCCT ACCGGCACTGCTGGTCATGGTGTTGGCTGATCTCTCTTTAGGATTAATTAACCGCTCGGCCCGGCAACTGAATGTCTTTT TTCTGGCGATGCCCATTAAAAGCGCACTGGCGCTTTTTCTCTTACTGATCAGCCTGCCTTATGGCCTGCATCACTACCTG TCCCGTATGAGCGATACTGAACAGAAGATTGGTACGTTGATCCCGTTGATTAAAGGGGGGAATGATGTCCACTGA Protein sequence : MTDVLPGLTALALAMMRPYGILLILPLFTARSLGSSLLRNGLIVAIALPVTPLFLSAPIITNSSPVTWIGVLCTELLIGV VMGFVAALPFWAMNMAGFLIDTLRGATMSTLFNPGMGVESSLFGVLFTQILTVLFLISGGFNQVLAALYGSYDSLPIGQG IQPAADLLLFLQTEWQMMFELCLCFALPALLVMVLADLSLGLINRSARQLNVFFLAMPIKSALALFLLLISLPYGLHHYL SRMSDTEQKIGTLIPLIKGGNDVH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 4e-105 | 100 |
ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 1e-44 | 52 |
ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 9e-45 | 52 |
ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-44 | 52 |
ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 2e-44 | 51 |
ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-44 | 51 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliR1 | NP_991821.1 | type III secretion apparatus protein | VFG0521 | Protein | 1e-44 | 51 |