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Name : treC (YP_3848) Accession : NP_995117.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 4373890 - 4375557 bp Length : 1668 bp Strand : + Note : highly similar to Yersinia pestis CO92 treC and Yersinia pestis KIM treC. Contains Glycoside hydrolase family 13 (Interpro|IPR006046, (GO:0005975)). Contains Alpha amylase, catalytic domain (Interpro|IPR006047, (GO:0005975)). Contains Alpha amylase, catal DNA sequence : ATGAATAATCCAATCCCTTGGTGGCAACATGGTGTCATCTATCAGATTTACCCGAAGAGCTTTCAGGACAGTACCGGTAA TGGCTATGGTGACCTGGCAGGCGTTGCGCAGCGGCTGGATTATCTGCAAAAGCTGGGCGTTGATGCCATTTGGCTGACAC CGGTGTATGTCTCGCCACAAGTGGATAACGGTTATGACGTGGCGGATTACTGCGCCATTGACCCCGCTTATGGCACATTG GATGACTTTAAACGTTTGGTCGCGGGTGCTCATCAGCGAGGCATACGCATCATCATGGATATGGTGTTCAATCACACCTC CACAGAACATGCCTGGTTTAAAGCTTCGCAGGATCGTAATAGCCCTTATCGGCAATTTTATATTTGGCGTGACGGTGACG GTGGAGACGGCAGTTTACCGAATAACTGGCGCTCGAAATTCGGTGGTCACGCATGGCAGTGGCACGCGGCCAGCGGCCAG TATTATCTGCATTTGTTTGCCCCAGAGCAGGCTGATCTGAATTGGGAACACCAACCGGTACGCGATGAGCTCAAAAAGGT GTGTGAATTTTGGGCCGATCTGGGGGTTGATGGTCTGCGTTTGGATGTCATCAATCTGGTGTCCAAACAGCAGGATTTCC CTAATGATCTGGACGGCGATGGCCGCCGTTTTTATACCGATGGCCCACGCATTCATGAGTTTTTGCAGGAACTGAGCCGC GATGTGTTCCAGCCACGCCGCCTGATGACGGTAGGCGAGATGTCATCCACCCGTCTCGAGCATTGTCAGCGATATGCGGC ATTAGGCGGTGATGAGTTATCCATGACCTTTAATTTCCATCACCTGAAAGTGGATTATCTTAACGGTGAAAAGTGGTCAT TGATGCCGCCGAATCGGGTGGAGTTGAAACACATTTTTAATCAGTGGCAGCAAGGGATGCACAACCGAGCATGGAACGCA CTATTTTGGTGTAATCACGATCAACCACGCATTGTCTCGCGTTTTGGTCATGAAGGCGCACTACGTTTGCCAGCGGCAAA GATGCTGGCGATGGTACTGCACGGTATGCAGGGCACGCCTTATATTTATCAGGGGGAAGAAATTGGCATGACGAACCCCA ATTTCACTGATATCACTCAATACCGTGATGTTGAAAGCCTGAATATGTTTGCCGAACTGAGTGTGGCAGGCCGCGAACCC GATGAGTTATTGGCGATTCTGGCAGCTAAATCCCGTGATAATAGCCGTACCCCCATGCAATGGGATAGCAGCGATAATGC GGGTTTCAGCCAAGGCACTCCCTGGATTGCCCCTTGCAGCAATTATCATGAGATTAACGTTAATGCCGCATTGGCCGACG CTGACTCGGTGTTTTATGCCTATCAATACCTGATAGCCCTGCGTAAACAATACGATATTTTCACTTTCGGTGATTATCAG GATCTTTGCCCACAGCACCCTGATTTATGGTGCTATTTGCGCAGTTGGCAAGGGAAGCAACTGTTGGTAGTCGCTAACCT GAGTGAAGAGCCCCAGCGATGGCAACCCGAGGGCCTCACGCTGGACGGTAATTGGCAATTATTGATGAGCAGCTACGACC AAAGCGCCTTCCAACCGCAAGATATGATATTACGCGGATATGAGGGGATTTATTGGGTATGTGAGTAA Protein sequence : MNNPIPWWQHGVIYQIYPKSFQDSTGNGYGDLAGVAQRLDYLQKLGVDAIWLTPVYVSPQVDNGYDVADYCAIDPAYGTL DDFKRLVAGAHQRGIRIIMDMVFNHTSTEHAWFKASQDRNSPYRQFYIWRDGDGGDGSLPNNWRSKFGGHAWQWHAASGQ YYLHLFAPEQADLNWEHQPVRDELKKVCEFWADLGVDGLRLDVINLVSKQQDFPNDLDGDGRRFYTDGPRIHEFLQELSR DVFQPRRLMTVGEMSSTRLEHCQRYAALGGDELSMTFNFHHLKVDYLNGEKWSLMPPNRVELKHIFNQWQQGMHNRAWNA LFWCNHDQPRIVSRFGHEGALRLPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPNFTDITQYRDVESLNMFAELSVAGREP DELLAILAAKSRDNSRTPMQWDSSDNAGFSQGTPWIAPCSNYHEINVNAALADADSVFYAYQYLIALRKQYDIFTFGDYQ DLCPQHPDLWCYLRSWQGKQLLVVANLSEEPQRWQPEGLTLDGNWQLLMSSYDQSAFQPQDMILRGYEGIYWVCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-121 | 45 |
