|
Name : tnp_39 (YP_3525) Accession : NP_994801.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : transposase for the IS1541 insertion element Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 4012858 - 4013316 bp Length : 459 bp Strand : + Note : highly similar to Yersinia pestis CO92 and highly similar to tnp and Yersinia pestis KIM y0754 (residues 1 to 152 of 170 are highly similar to residues 19 to 170 of 170 from Yersinia pestis KIM y0754). Contains Transposase, mutator family (Interpro|IPR001 DNA sequence : ATGAGGGATGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCA GGTGTTCTACAGGGAAAAACGCAGAGCGATTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGG AAGCAGAATACTGTGTGGATCACATCCATATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTAC CTGAAGGGAAAGAGCAGTCTGATGCTTTATGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTG TCGAGGGTATTACGTTGATACGGTAGGGAAAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATA AAATGGGTGAGCAACTCTCGATCCCGTATCCCGGTAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGY LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 3e-65 | 93 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 5e-43 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 5e-46 | 63 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 2e-31 | 55 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 1e-31 | 55 |
