|
Name : YP_3275 (YP_3275) Accession : NP_994565.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : transposase for insertion sequence IS100 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 3650888 - 3651910 bp Length : 1023 bp Strand : + Note : highly similar to Yersinia pestis CO92 YPO4010 and Yersinia pestis KIM y4031. Contains Integrase, catalytic domain (Interpro|IPR001584, (GO:0006310)). Contains IS21-like element transposase, HTH domain (Interpro|IPR007101) DNA sequence : ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCTTGATGAAAATCTGGTGAACTTC GACAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA Protein sequence : MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNF DKHPLHHPLSIYDSFCRGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 9e-165 | 100 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 9e-165 | 100 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 7e-165 | 100 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 9e-165 | 100 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 7e-165 | 100 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 9e-165 | 100 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 9e-164 | 99 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 9e-164 | 99 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 9e-164 | 99 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 9e-164 | 99 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 4e-163 | 99 |
| unnamed | AAG37051.1 | unknown | Not tested | espC PAI | Protein | 6e-154 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YP_3275 | NP_994565.1 | transposase for insertion sequence IS100 | VFG1514 | Protein | 5e-164 | 99 |
| YP_3275 | NP_994565.1 | transposase for insertion sequence IS100 | VFG1626 | Protein | 5e-164 | 99 |
| YP_3275 | NP_994565.1 | transposase for insertion sequence IS100 | VFG1607 | Protein | 5e-164 | 99 |
| YP_3275 | NP_994565.1 | transposase for insertion sequence IS100 | VFG1461 | Protein | 2e-163 | 99 |
| YP_3275 | NP_994565.1 | transposase for insertion sequence IS100 | VFG0780 | Protein | 3e-154 | 96 |
