|
Name : tra5F (YP_3119) Accession : NP_994412.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : IS1661 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3471979 - 3472764 bp Length : 786 bp Strand : - Note : highly similar to Yersinia pestis CO92 YPO4092 and Yersinia pestis KIM y4108. Contains Integrase, catalytic domain (Interpro|IPR001584, (GO:0006310)) DNA sequence : TTGGCACGCAGTACATACTATTATCATGCATCGAAACCGGACGGTGTAATTGATGACTATGCAGATGCGGTAAAAGCGAT TGGCGCCCTAAGCAGACGACACGCACAGCGCTACGGTTATCGCCGGATGACGGTCGCACTGAGAAAAGAAGGGTTCACAC TGAATCACAAAACGGTGCGAAAACTGATGAATCAGCACGGGTTACTCAGCCTCATTCGGCGGAAAAAATATCGCTCCTAT AGGGCCGATGGTGGCCGGGCATCCGATAATCTATTGGCTCGTAATTTTACATCCGAAATCAGTGGATTGAAGTGGTGTAC AGATGTCACAGAGTTCCGAGTTGGAGCACAGAAGCTGTATTTGTCGGTGATACAAGACCTGTTTAATAATGAGATTATTT CTTGGCATATGTCAGAAAGAGCAGCATTAATCCTGACGTGCAAGACGCTGGAAAAAGCGCTGAAAGTGAAAGGGAGAAAA GAAGGCCTGATGTTGCACAGCGATCAGGGCTGGCATTACCGAACGCCGATGTGGCGCTCAATGCTTGTCGAGGCGGGGAT AAGGCAAAGTATGTCACGCAAAGGCAATTGTTTAGATAATGCAGTGATGGAAAATTTCTTCAGTCACCTGAAAGCCGAGA TGTATCACCGTAAGAAGTACGATTCAGCCACAGTTTTAAAGCGTGACATTGTAGAATATATCCATTATTACAATACAGAG CGCATTAGCCTGAAAACAGGCGGAATGAGTCCGGCAGAATACCGGACTCAGGTAGAAAAGCAGTAA Protein sequence : MARSTYYYHASKPDGVIDDYADAVKAIGALSRRHAQRYGYRRMTVALRKEGFTLNHKTVRKLMNQHGLLSLIRRKKYRSY RADGGRASDNLLARNFTSEISGLKWCTDVTEFRVGAQKLYLSVIQDLFNNEIISWHMSERAALILTCKTLEKALKVKGRK EGLMLHSDQGWHYRTPMWRSMLVEAGIRQSMSRKGNCLDNAVMENFFSHLKAEMYHRKKYDSATVLKRDIVEYIHYYNTE RISLKTGGMSPAEYRTQVEKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 7e-58 | 49 |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 1e-56 | 48 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 3e-43 | 44 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 3e-43 | 44 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 2e-47 | 43 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 3e-48 | 43 |
