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Name : fimC6 (YP_3012) Accession : NP_994311.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Virulence Product : fimbrial chaperone protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3352157 - 3352876 bp Length : 720 bp Strand : + Note : highly similar to Yersinia pestis CO92 YPO0699 and Yersinia pestis KIM y3479. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687, (GO:0005524)). Contains Bacterial pili assembly chaperone (Interpro|IPR001829, (GO:0030288)) DNA sequence : ATGAAGAAGCTCTCATTAATCGCGTTGACCAGCACAGTGGTATTCACCAGTTATACCGCCAATGCTGCGATTGCATTAGA CCGGACGCGAATTATTTATAACGGGCAGGATAAGTCCATTAGCCTGAATATCAGTAATGAAAATAAAACACTGCCCTATT TAGCACAGGCGTGGATTGAGAATGAACAACAGCAAAAAGTCACCACCCCGTTAGTGGCAACGCCACCAGTTCAGCGAGTA GAAGCGGGTAAGAAAAGCGCGGTGCGTATCTCTGCCACCCCTGAGGCGCTGAAATTGCCACAAGATCGCGAGTCACTGTT CTACTTCAATCTGCGTGAAATTCCGCCTCGCAGTGAAAAATCTAATGTCATGCAGATTGCCTTACAAACCAAAATCAAAC TGTTCTACCGGCCAGAAGGGATTACCCCTGCTACGGGCCAAATCTGGCAGGAACAACTGGTTCTGCATAAAACGGCGCAA GGTTTTCGGCTAGAGAACCCCACTCCCTATTACATTACGGTCGTTGGGCTGGCGGAGAAAGGTAAGTCATCGGCTGACAG CAATTTTCAACCTTTGATGGTTGCGCCCAAATCCAGTGCTGAGCTGAAATCTGCCAGTTTCACCGCCCCCGTCCTGACCT ACATTAACGATTATGGTGGCCGACCAGAACTGAGTTTCAGTTGCAGCGGCAGTACTTGCCGGGCAGCTAAAGCGATTTAA Protein sequence : MKKLSLIALTSTVVFTSYTANAAIALDRTRIIYNGQDKSISLNISNENKTLPYLAQAWIENEQQQKVTTPLVATPPVQRV EAGKKSAVRISATPEALKLPQDRESLFYFNLREIPPRSEKSNVMQIALQTKIKLFYRPEGITPATGQIWQEQLVLHKTAQ GFRLENPTPYYITVVGLAEKGKSSADSNFQPLMVAPKSSAELKSASFTAPVLTYINDYGGRPELSFSCSGSTCRAAKAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 3e-66 | 62 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 9e-74 | 61 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-74 | 59 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 1e-74 | 59 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 2e-74 | 59 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-74 | 58 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 2e-74 | 58 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 2e-74 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimC6 | NP_994311.1 | fimbrial chaperone protein | VFG0885 | Protein | 1e-66 | 62 |
| fimC6 | NP_994311.1 | fimbrial chaperone protein | VFG1547 | Protein | 9e-75 | 59 |
| fimC6 | NP_994311.1 | fimbrial chaperone protein | VFG0896 | Protein | 1e-74 | 58 |
