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Name : fhaC3 (YP_2918) Accession : NP_994222.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : hemolysin activator protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 3240418 - 3242106 bp Length : 1689 bp Strand : + Note : highly similar to Yersinia pestis CO92 YPO0598 and Yersinia pestis KIM y3580. Contains Hemolysin activator HlyB (Interpro|IPR005565) DNA sequence : ATGTCGCGTTTTTATTATTCTATATTAGTGGCTGGCGTATTATTGAAAATAGTGGCTATTCCAGATGCCAGTTATGGCGC GGAATTAGCGCCCGTTCAACAAAGTATTCACCAACAGGAGCGGCAACGGGCACTTGAAGAGCGCCTGGCTCCGCCGACGC CGGATGTGCGCTTATCTGCGCCCTCGGCCTTTTTTAGCCGTATTATTTTTCCGCTGGAGACACCCTGTTTTGTTATTAAT CGGATAAAAATCAGTGGGGCCGAGCCATTGCCCCGTTGGTTGCCGTTGCAACGCATTGCCGATCAAGCGCAAGGCCAGTG TCTGGGGGCCAAGGGCATTAACCTGCTAATGAGCCAAATGCAGAACCGTTTGGTCGATCACGGCTATGTGACTACCCGAG TGCTGGCCCCACAGCAGGATTTAAACAGCGGCACGCTGGCGCTAAACGTCGTGCCCGGCAAAATACGCGGTGTGGAACTG ACGCCAGACAGTAATAGGTATGTCACGTTATTCAGCGCTTTTCCTGCCCGTGCCGGGACGCTGTTGGATTTACGCGATAT CGAACAAGGCTTGGAAAATCTACAGCGTGTTCCCACGGTGCAAGCCAATATGGTGTTGATCCCAGGCTCTGCCCCCGGTG AGACGGATATCATTCTGAACTGGCAACAGCGAAAAATGTGGCGGCTGGCAGCCTCACTGGATGATTCGGGTACCCGCAGC ACTGGCCGCTATCAAGGGGGGGCGACGTTGTTTCTGGATAACCCGCTTTCTCTGAGTGATCTTTTTTATGTCTCAGCTGG TGGCGCACTGCAACGCCGTGGCGATAAAGGCACGAATAATCTGACCGGCCATTACTCATTGCCATTCGGTTATTGGACCG CAGGCATGACCGCCAGCCGTTATGACTATTACCAGGCCGTTGCGGGCCTGAATGGCGATATCAACTACCGAGGTGAAAGT GAGAACGTGGCGTTCCAACTCAGCCGGTTGTTGCACCGTAATGCCAGCCAGAAAACCACCTTTACCTACGATGTGCTAAC CCGTTCGTCGAAAAACTATATCAACGATACCGAAGTGGAAGTACAGCGCCGCCGCACCTCGGCCTGGCGGATCGGGCTAC AACACCGCCACTTTATCTCGCAGGCGATTTTGGATGCCGGTATCAGCTATCAGCGTGGCACCCGCTGGTTTGGTGCCATA CCCGCGCAGGAAGAGTATTTCGGCGAAGCCACCGCCCTGAGCAAAATTCTGCGATTGAATGCGCAACTGGATATTCCTTT TGTGGTTATGGCGCAAAACCTCCATTACAACCTGCAATATCAGCGCCAAAGTACCAACACGCCACTGACGCCGCAGGATC AGTTCTCCATTGGTGGCCGCTGGTCGGTGCGTGGTTTTAATGGTGAGCGCACGCTGATTGCCGATCGCGGCTGGTGGGTG CGCAATGATATCGGCTGGTATCTGCCGCTACCGGGGCATGAGCTGTATGTCGGTGTGGATTACGGCGAAGTCGGTGGTCG TAGTGGCGCTTATCTGTTAGGCCGCCATTTGGCGGGCAGTGCGGTCGGGGTACGTGGCAACGTACTGAATACCCGCTATG ACCTGTTTGCGGGGAAACCGCTCTCTAAACCTAATGGTTTCAAAACCGATTCGCTGGCGGTGGGTTTTAACCTGAATTGG CTGTACTGA Protein sequence : MSRFYYSILVAGVLLKIVAIPDASYGAELAPVQQSIHQQERQRALEERLAPPTPDVRLSAPSAFFSRIIFPLETPCFVIN RIKISGAEPLPRWLPLQRIADQAQGQCLGAKGINLLMSQMQNRLVDHGYVTTRVLAPQQDLNSGTLALNVVPGKIRGVEL TPDSNRYVTLFSAFPARAGTLLDLRDIEQGLENLQRVPTVQANMVLIPGSAPGETDIILNWQQRKMWRLAASLDDSGTRS TGRYQGGATLFLDNPLSLSDLFYVSAGGALQRRGDKGTNNLTGHYSLPFGYWTAGMTASRYDYYQAVAGLNGDINYRGES ENVAFQLSRLLHRNASQKTTFTYDVLTRSSKNYINDTEVEVQRRRTSAWRIGLQHRHFISQAILDAGISYQRGTRWFGAI PAQEEYFGEATALSKILRLNAQLDIPFVVMAQNLHYNLQYQRQSTNTPLTPQDQFSIGGRWSVRGFNGERTLIADRGWWV RNDIGWYLPLPGHELYVGVDYGEVGGRSGAYLLGRHLAGSAVGVRGNVLNTRYDLFAGKPLSKPNGFKTDSLAVGFNLNW LY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 8e-169 | 64 |
