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Name : tra5B (YP_0248) Accession : NP_991647.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 250956 - 251765 bp Length : 810 bp Strand : + Note : highly similar to Yersinia pestis KIM y0504. Contains Integrase, catalytic domain (Interpro|IPR001584, (GO:0006310)) DNA sequence : GTGGAATATCTGCTGGCGGCGTACCGTATCGGAGTACGCAGAGGGTGCAGGCTGATGATGCAGAGCCGCACTGTATACAA CTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGCGGAGACGCGCATCCGTTATGGCTGTC CGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAACGCACCGTATTTACTGTCTTGAGGGT CTCAATCTACGTTCGAAACGTCCACGGTGGCATGTGACAGCGAGGCACAGGCACGCAAGTCCAGAAGTGACCGCGTTAGA TCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGTCAGGGCGCTAACTATAGTGGATAATT TTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATGTTGTGGCTGTCATGGACAGATTAAAA CATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTCATCTCGAAGTCGATGGACCGATGGGC GTATGAAAACAGGGTCTCGATGGACTTTTCAGGCCCCGGAAAGCCTACAGATAATGCCTTTATCGAGTCATTTAATGGCA GTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTCAGGAGAAAATTGAACAATGGCGGCAA GAATATAATCATTTTCGTCCGTATTCTTCGTTAAATAACCTGACTCCGGCAGAATTTGCCCGAAGTCATCAAAAAGGTCC GGATCTCTGA Protein sequence : MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG LNLRSKRPRWHVTARHRHASPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLK HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ EYNHFRPYSSLNNLTPAEFARSHQKGPDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 4e-50 | 53 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 7e-37 | 47 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 9e-47 | 46 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 9e-46 | 43 |
