|
Name : tnp_24 (YP_2245) Accession : NP_993574.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : transposase for the IS1541 insertion element Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 2492048 - 2492557 bp Length : 510 bp Strand : - Note : highly similar to Yersinia pestis CO92 tnp and Yersinia pestis KIM y3987. Contains Transposase, mutator family (Interpro|IPR001207). Contains Transposase IS200-like (Interpro|IPR002686). DNA sequence : TTGCGGTCTGGCAACTGCAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGAAAAGAGCTTAGCGCACAC CCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGA TTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATGCTGTGTGGATCACATCCAT ATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTA TGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGA AAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATAAAATGGGTGAGCAACTCTCGATCCCGTAT CCCGGTAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAECCVDHIH MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPY PGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 2e-66 | 94 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 5e-43 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 3e-46 | 63 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 3e-32 | 55 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 4e-32 | 55 |
