Gene Information

Name : ybtA (YP_1655)
Accession : NP_993008.1
Strain : Yersinia pestis 91001
Genome accession: NC_005810
Putative virulence/resistance : Virulence
Product : transcriptional regulator YbtA
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1819091 - 1820050 bp
Length : 960 bp
Strand : -
Note : highly similar to Yersinia pestis CO92 ybtA and Yersinia pestis KIM ybtA. Contains Helix-turn-helix, AraC type (Interpro|IPR000005, (GO:0006355))

DNA sequence :
ATGACAGAGTCACCGCAAACGCAATCTGAAATCTCTATTCACCAGTTGGTGGTCGGGAAACCTGCAAACGATGGCAATAT
TCCTGCTCAGTGTGAACTGCTGCGCTGTTCGTTGCAGGAAGGTATGGATATTTTGCTCTGGAGGGGCCATTTTGCGCGGC
CTGAGACGTTGCAGCTACACGACGATCTGGGCAGGATTAACTTCTCGTGCATCCTGGAAGGCACATCGCGCTTTGCGATT
CAGGGACTCCGGCGCCACACCGACTGGGAGCTTGCGCGCAATCGCCATTACATTACCCATACGCCAGACTGTCGCGGCAG
CGCCTCCTATTGTGGCCGATTCGAGAGCATTACCCTCTCCTTCAGCCCTGAAACCCTCGCGCTGTGGGTGCCGGATATTA
GCGCGGTCATTAAGAATAAGATCGACTCCCACTGCTGTTGCCAGCAGCAGCGTTGTAATGCTGAAACCCACTTAACGGCT
CAGGCCTTGCGTCACGCGCTGATGCGCATGCACGGCGGCTTCAGTCATGAACAAAAGCCGTCGACGCTATGGTTGCAGGG
GCAAAGTCTGGTCATGCTCAGTCTGGTGCTGGATGAACATCGCGAAGACGCCAGTTGCCTCTCCTGCCACTTCAACCCGA
TGGAACGCCAGAAACTGCTGCGGGCGAAGGATCTGCTGCTGGCTGATCTGACGCAAGCGCCGGGCGTCGCGGAGCTGGCC
AGAGAGTCCGGTCTGAGCGTTCTCAAAATTAAGCGAGGCTTCCGCGTTCTGTTCAACAACAGCGTCTATGGCCTGTTTCA
GGCTGAACGAATGCAGGAAGCCAGAAGACGCCTGGCCAACGGCAATACCTCCGTCATGACGGTGGCGGCCGATCTGGGCT
ATGCCAACGCCAGCCATTTCTCTGCCGCCTTCCAGAAACAGTTTGGCGTAACCCCTTCGACCTTTAAACGCGTGATGTAA

Protein sequence :
MTESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLHDDLGRINFSCILEGTSRFAI
QGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLSFSPETLALWVPDISAVIKNKIDSHCCCQQQRCNAETHLTA
QALRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA
RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSAAFQKQFGVTPSTFKRVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtA CAA21389.1 - Virulence HPI Protein 2e-140 100
ybtA YP_002346903.1 transcriptional regulator YbtA Virulence HPI Protein 2e-140 100
ybtA NP_669705.1 AraC family transcriptional regulator Virulence HPI Protein 2e-140 100
ybtA NP_993008.1 transcriptional regulator YbtA Virulence HPI Protein 2e-140 100
ybtA YP_070125.1 transcriptional regulator YbtA Virulence HPI Protein 2e-140 100
ybtA CAB46574.1 yersiniabactin transcriptional regulator, YbtA Virulence HPI Protein 7e-139 99
ybtA YP_001006814.1 transcriptional regulator YbtA Not tested HPI Protein 1e-138 99
APECO1_1057 YP_853074.1 AraC family transcriptional regulator Not tested PAI IV APEC-O1 Protein 1e-139 99