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Name : hpaF (YP_1628) Accession : NP_992984.1 Strain : Yersinia pestis 91001 Genome accession: NC_005810 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3232 EC number : - Position : 1778005 - 1778403 bp Length : 399 bp Strand : - Note : highly similar to Yersinia pestis CO92 hpaF and Yersinia pestis KIM hpaF. Contains 5-carboxymethyl-2-hydroxymuconate isomerase (Interpro|IPR004220, (GO:0006725), (GO:0008704)) DNA sequence : ATGGCGCATTTCTACGCAGAATGTACTGACAACATCCGTGAACAGGCCGAATTACCCGTCTTGTTTTCTAACGTAAATCA AACTCTGGTGAACACGGGTCTTTTCCCATTGGCAGGTATTCGCAGCCGTGCCATTTGGCTGGATACCTGGCAAATGGCGG ATGGACAGCAAGACTACGCTTTTGTCCATATGACGCTAAAAATAGGCTACGGACGCAGTATCGAGCACCGACAGGCGGTC GGAAAGACATTGTTTGCCTTGATTCAAGCGCATTTCGCAGCCCTGATGTCCCAACGTTATCTGGCTTTGTCGTTCGTCAT AGAGGAGCTGGATCCAACGCTTAGCTTTAAACAGAACAATGCTCATACATTGTTCCAACAGGGAACCTCTGCATGTTAG Protein sequence : MAHFYAECTDNIREQAELPVLFSNVNQTLVNTGLFPLAGIRSRAIWLDTWQMADGQQDYAFVHMTLKIGYGRSIEHRQAV GKTLFALIQAHFAALMSQRYLALSFVIEELDPTLSFKQNNAHTLFQQGTSAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaF | AAO17181.1 | HpaF | Not tested | tcd island | Protein | 7e-47 | 75 |
