Gene Information

Name : hcp4 (YP_1520)
Accession : NP_992879.1
Strain : Yersinia pestis 91001
Genome accession: NC_005810
Putative virulence/resistance : Unknown
Product : hemolysin-coregulated protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 1670890 - 1671234 bp
Length : 345 bp
Strand : +
Note : highly similar to Yersinia pestis CO92 YPO1872

DNA sequence :
ATGAGTTTTAATACCTATTTAAAATTAACAGGAAGTGAACAAGGATTAATCTCTGCTGGATGCAGTTCATTTGACTCGAT
TGGAAATCGACATCAGAATGATCATGACGATGAAATTCAGATACTATCCTTAAATCACGCCATAACAAGAGAGCAACATT
GTACACATCATCCTGTTGAATTTATCAAACCAATTGACAAATTATCACCACTAATGGCTATAGCCATATCCAATAATGAA
ATATTAACCCCATCATTTTCAATTTATAGATTAAATCAATTTGGTGCTTTGGAAATATTTTATGAGATAAAATTAACTAA
AGCTACGATAATAGATATCAGTTAA

Protein sequence :
MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNE
ILTPSFSIYRLNQFGALEIFYEIKLTKATIIDIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2644 YP_859414.1 hypothetical protein Not tested Not named Protein 2e-12 48
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 5e-22 48
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-22 48