Gene Information

Name : cDA11 (YP_1461)
Accession : NP_992823.1
Strain : Yersinia pestis 91001
Genome accession: NC_005810
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 1619915 - 1620832 bp
Length : 918 bp
Strand : -
Note : highly similar to Yersinia pestis CO92 YPO1573 and Yersinia pestis KIM y2591. Contains Polysaccharide deacetylase (Interpro|IPR002509, (GO:0005975), (GO:0016810))

DNA sequence :
TTGCCTGCGATGAATCGCAAACTCAGGAGAAGAACTATGGCTAAAGAAATATTCTGTGCGTTTGGCGTTGATGTTGACGC
GGTGGCCGGTTGGTTAGGATCTTATGGCGGTGAGGACTCACCCGATGATATTTCACGCGGTATGTTCTCCGGTGAAGTGG
GTACGCCACGGTTGCTCAAACTCTTTGCTGACCATAACCTGCGGGCCACCTGGTTTATTCCGGGTCACTCAATCGAAACA
TTCCCTGAACAAATGAAAGCGGTAGCCGCGGCTGGACACGAAGTGGGGATCCATGGTTACAGCCATGAAAACCCTATCGC
CATGACACCAGCGCAAGAAGAGGCCGTACTGGATCACTGTATCGCCCTCCTCACTCAATTGACCGGAAAATCGCCCACGG
GCTATGTCGCACCTTGGTGGGAATTTAGCAACGTCACCAACGAGCTGTTGCTGAAAAAAGGCATTAAATATGACCACAGC
CTGATGCACCACGATTTTCACCCCTACTATGTGCGCGTCGGCGACCATTGGACCCGCATCGATTACAGCAAGTCCCCAGA
CCACTGGATGAAACCATTGCAACGAGGGGCCGAAACCGCACTGGTGGAGATCCCGGCTAACTGGTACCTGGATGATTTAC
CCCCCATGATGTTTATCAAGAAAGCGCCCAATAGCCATGGTTTTGTTAATCCCCGCCATCTGGAAGAGATGTGGCGCGAT
CAGTTCGACTGGGTATACCGAGAACATGATTATGCCGTATTTACCATGACCATCCATCCTGACGTATCCGGTCGCCCGCA
AGTGTTATTAATGCTGGAACGGTTGCTCAAACATATCCAGAGCCATCAGGGTGTACGTTTCGTGACCTTTGATGAGATTG
CTGACGACTACTTGCGCCGTATGCCGCGCAAAATTTGA

Protein sequence :
MPAMNRKLRRRTMAKEIFCAFGVDVDAVAGWLGSYGGEDSPDDISRGMFSGEVGTPRLLKLFADHNLRATWFIPGHSIET
FPEQMKAVAAAGHEVGIHGYSHENPIAMTPAQEEAVLDHCIALLTQLTGKSPTGYVAPWWEFSNVTNELLLKKGIKYDHS
LMHHDFHPYYVRVGDHWTRIDYSKSPDHWMKPLQRGAETALVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRD
QFDWVYREHDYAVFTMTIHPDVSGRPQVLLMLERLLKHIQSHQGVRFVTFDEIADDYLRRMPRKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 4e-140 99