Gene Information

Name : phnL3 (YP_1387)
Accession : NP_992751.1
Strain : Yersinia pestis 91001
Genome accession: NC_005810
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1528115 - 1528783 bp
Length : 669 bp
Strand : -
Note : highly similar to Yersinia pestis CO92 YPO1497 and Yersinia pestis KIM y2671. Contains ATP/GTP-binding site motif A (P-loop) (Interpro|IPR001687, (GO:0005524)). Contains ABC transporter (Interpro|IPR003439, (GO:0016020)). Contains AAA ATPase (Interpro|IPR

DNA sequence : 
ATGCTACATTTACAGAATGCAAAAAAATATTACACAACAAAAGTCATAAAAACCAGAGTCCTAAATAATATAACGCTTTC
TGTAGAGAAAGGAGAGTTTGTTTCTATCATGGGGCCATCAGGATCAGGTAAATCAACACTACTCAATATTGTCGGCATGT
TTGAATCCTTGGATTCCGGATCGCTTACGTTGGCCGGAAAACATGTTGATAACCTGGGTTACTCTCAACGGATCACATTA
AGGCGCGAATTAATAGGCTATATATTTCAATCATTTAATCTTATCCCACATTTATCAATATTTGATAATGTCGAGTTGCC
GTTGAAATATCGTGGGGTCGCTAAAAAAGACCGTATTGAGCAAGTAAATCAAATTTTGAGCCTTTTGGGGATCGATAACC
GAAAAAACCATAAACCCATGCAATTATCAGGTGGTCAACAACAACGTGTGGCCATTGCCAGAGCGATGGTAACTTGCCCC
GCATTAATATTGGCTGATGAGCCTACCGGTAATTTAGACAGTAAGAATGCTCGAGCGGTACTTGAGCAATTAAAAGCAAT
AAACCAGTCAGGGACTACCATCATCATGGTCACACACTCAGATGAAGCGTCAAGTTATAGTAATAGAATACTCAACATGA
AAGATGGGAATATTAACATGAAAAAATAG

Protein sequence : 
MLHLQNAKKYYTTKVIKTRVLNNITLSVEKGEFVSIMGPSGSGKSTLLNIVGMFESLDSGSLTLAGKHVDNLGYSQRITL
RRELIGYIFQSFNLIPHLSIFDNVELPLKYRGVAKKDRIEQVNQILSLLGIDNRKNHKPMQLSGGQQQRVAIARAMVTCP
ALILADEPTGNLDSKNARAVLEQLKAINQSGTTIIMVTHSDEASSYSNRILNMKDGNINMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-33 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phnL3 NP_992751.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-44 49
phnL3 NP_992751.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 44
phnL3 NP_992751.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-40 44
phnL3 NP_992751.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-41 43