Gene Information

Name : dksA2 (PSPPH_0861)
Accession : YP_273142.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : RNA polymerase-binding protein DksA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 1031503 - 1031943 bp
Length : 441 bp
Strand : -
Note : identified by similarity to SP:P18274; match to protein family HMM PF01258; match to protein family HMM TIGR02420

DNA sequence :
ATGCCCACCCCAGAAAAGCAACACAGCCATCTAATCGGCGGCTTTGCACCCTACCCGGAAACAAAGGGTGAGGAGTACAT
GAGCGAGCCCATGCGCGCGCACTTCACCAAGATCCTGAACAAGTGGAAGCAGGACTTGATGCAAGAGGTCGACCGAACGG
TAGACCACATGAAGGACGAAGCAGCCAACTTTCCCGACCCGGCCGACCGTGCCAGTCAGGAAGAAGAGTTCAGCCTCGAA
CTTCGTGCCCGTGACCGCGAACGCAAGCTGATCAAGAAGATCGACAAGACGCTGCAACTGATCAAGGACGAAGAATACGG
CTGGTGTGAATCGTGCGGCGTAGAGATCGGCATTCGCCGTCTTGAAGCGCGCCCGACTGCCGACCAGTGCGTCGACTGCA
AGACACTTGCTGAAATCAAGGAAAAACAGGTCGGTAAGTGA

Protein sequence :
MPTPEKQHSHLIGGFAPYPETKGEEYMSEPMRAHFTKILNKWKQDLMQEVDRTVDHMKDEAANFPDPADRASQEEEFSLE
LRARDRERKLIKKIDKTLQLIKDEEYGWCESCGVEIGIRRLEARPTADQCVDCKTLAEIKEKQVGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 2e-42 66
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 2e-42 66