Gene Information

Name : PSPPH_0086 (PSPPH_0086)
Accession : YP_272398.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : Sulfate/thiosulfate import ATP-binding protein cysA(Sulfate-transporting ATPase)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1118
EC number : 3.6.3.25
Position : 94167 - 95147 bp
Length : 981 bp
Strand : -
Note : identified by match to protein family HMM PF00005; match to protein family HMM TIGR00968

DNA sequence :
ATGTCGATCGAAGTCCGTAACGTCAGCAAGAATTTCAACGCCTTCAAGGCCCTGAACAACATCAGTCTGGACATCCAGAG
TGGCGAGCTGGTGGCTTTGCTCGGCCCGTCAGGCTGCGGCAAGACCACCCTGTTGCGCATTATTGCCGGCCTGGAAACCC
CGGATGACGGCAGTATCGTGTTCCATGGCGAAGATGTTTCCGGCCATGACGTGCGTGATCGCAACGTCGGCTTTGTGTTC
CAGCATTACGCGCTGTTCCGCCACATGACGGTGTTCGACAACGTCGCGTTCGGCCTGCGCATGAAGCCCAAACGCGAGCG
CCCGAACGAGACACGGATTGCCGAGAAGGTCCATGAGCTGCTGAACATGGTGCAGCTGGACTGGCTGGCCGACCGTTATC
CGGAGCAACTGTCGGGTGGACAGCGCCAGCGCATCGCCCTGGCCCGCGCCCTGGCGGTCGAGCCAAAAGTGCTGCTGCTG
GACGAGCCGTTCGGGGCGCTGGACGCCAAGGTGCGCAAGGAACTGCGTCGCTGGCTGGCGCGCCTGCACGAAGACATTAA
CCTGACCTCGGTATTCGTGACCCACGATCAGGAAGAGGCCATGGAAGTGGCTGATCGCATCGTGGTGATGAACAAGGGTG
TGATCGAACAGATCGGCTCGCCGGGCGAGGTCTACGAGAACCCGTCCAACGACTTCGTCTACCACTTCCTGGGTGACTCC
AACCGCCTGAGCCTGGGCGAGGAAGGGCACCTGTTGTTCCGTCCGCATGAAGTGTCGTTGTCGCATCAGGAAATCGAAGA
CCACCACGCCGCTGAAGTCCGCGACATCCGCCCGCTGGGCGCGACAACGCGGGTCACGCTGAAAGTGGAAGGGCAAAGCG
AACTGATCGAGGCCGAAGTGGTAAAAGACCACGACAGCCTGGTAGGCCTGGCCAAGGGCGAGACGCTGTTCTTCAAACCG
AAGGTCTGGCAGAAGCTTTAA

Protein sequence :
MSIEVRNVSKNFNAFKALNNISLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDDGSIVFHGEDVSGHDVRDRNVGFVF
QHYALFRHMTVFDNVAFGLRMKPKRERPNETRIAEKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKVLLL
DEPFGALDAKVRKELRRWLARLHEDINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPSNDFVYHFLGDS
NRLSLGEEGHLLFRPHEVSLSHQEIEDHHAAEVRDIRPLGATTRVTLKVEGQSELIEAEVVKDHDSLVGLAKGETLFFKP
KVWQKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-34 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_0086 YP_272398.1 Sulfate/thiosulfate import ATP-binding protein cysA(Sulfate-transporting ATPase) VFG0344 Protein 2e-32 42