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Name : pilD (PSPPH_0818) Accession : YP_273100.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type IV pilus prepilin peptidase PilD Function : - COG functional category : N : Cell motility COG ID : COG1989 EC number : - Position : 978606 - 979478 bp Length : 873 bp Strand : - Note : identified by similarity to SP:P22610; match to protein family HMM PF01478; match to protein family HMM PF06750 DNA sequence : ATGCCCCTCCTCGACCTCTTGGCCAGCTCACCGCTGGCCTTCGTCATTACCTGCTGCATTCTCGGCCTGATCATCGGAAG CTTCCTCAACGTAGTCGTCTACCGCCTCCCCAAAATGATGGAGCGCGACTGGAAAGCCCAATCCCGTGAAATGCTCGGCC TGCCCGCGGAACCCGATCAGCCCGCCTTCAACCTGAACCGCCCTCGCTCCAGCTGCCCGCGCTGCGCGCACAAAATCCGC CCGTGGGAAAACCTGCCGGTCATCAGCTATCTGCTGCTGCGCGGTAAATGCTCACAATGCAAAGCCCCGATCAGCAAACG CTACCCATTGGTAGAGCTGACCTGCGCAGTGTTGTCGGCCTACATCGCCTGGCATTTCGGCTTCGGCTGGCAGGCAGCGG CGATGCTGGTGTTGAGCTGGGGCCTGCTGGCGATGAGTCTGATCGACGCCGATCACCAGCTGTTACCTGACTCTCTGGTG CTGCCACTGCTGTGGCTGGGCCTGATCGTAAACGCTTTCGGGCTGTTCACCTCGCTGAACGATGCGCTGTGGGGCGCGGT GGCCGGCTATCTGGCGCTGTGGTCGGTGTTCTGGCTATTCAAACTGGTGACCGGCAAGGAAGGCATGGGTTATGGCGACT TCAAGTTGCTGGCCATGCTTGGCGCATGGGGCGGCTGGCAGATTCTGCCGTTGACCATCCTGCTGTCATCGCTGGTGGGT GCGGTGCTTGGGGTGATCATGATGCGCGTGCGCAGGGTTGAAAGTGGTACGCCGATCCCCTTTGGTCCTTATCTGGCCAT TGCGGGGTGGATCGCTTTGCTCTGGGGTGGTCAAATAACCGACTCTTACATGCAGTTTGCCGGTTTCAGATGA Protein sequence : MPLLDLLASSPLAFVITCCILGLIIGSFLNVVVYRLPKMMERDWKAQSREMLGLPAEPDQPAFNLNRPRSSCPRCAHKIR PWENLPVISYLLLRGKCSQCKAPISKRYPLVELTCAVLSAYIAWHFGFGWQAAAMLVLSWGLLAMSLIDADHQLLPDSLV LPLLWLGLIVNAFGLFTSLNDALWGAVAGYLALWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVG AVLGVIMMRVRRVESGTPIPFGPYLAIAGWIALLWGGQITDSYMQFAGFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85237.1 | putative prepilin peptidase A | Not tested | PAI V 536 | Protein | 3e-20 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilD | YP_273100.1 | type IV pilus prepilin peptidase PilD | VFG0114 | Protein | 3e-92 | 79 |
| pilD | YP_273100.1 | type IV pilus prepilin peptidase PilD | VFG0234 | Protein | 2e-46 | 52 |
| pilD | YP_273100.1 | type IV pilus prepilin peptidase PilD | VFG2428 | Protein | 2e-41 | 51 |
| pilD | YP_273100.1 | type IV pilus prepilin peptidase PilD | VFG1882 | Protein | 3e-49 | 49 |
