Gene Information

Name : PSPPH_0758 (PSPPH_0758)
Accession : YP_273045.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : phage integrase site specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 887878 - 888834 bp
Length : 957 bp
Strand : +
Note : identified by match to protein family HMM PF00589; match to protein family HMM PF02899

DNA sequence :
ATGAGTGAGTTGGTGATGGCCAACGCCGGCGAGCGGCGACTGACTGCACTGGAATTCCAGGAACTGGCCTCAGTGCCGGC
AGCCGTCGAGTGGTTCGCCAATATCCGCAACCCGCGCACGCGCCGTGCGTACCAGGCCGATCTGCGCGAGTTCTGCAGCT
TTGTCGACCTGGCCGGTGCCGAAGAGTTTCGCGTCGTGAACCGGGCACACGTTTTAGCTTGGCGTGCCCAGCTGGAGCGA
CGCGCTCTTTCTGGAGCCACGATCCGGCGCAAACTGGCGACGCTGGCCAGCCCCTTCGATTACCTCCTGGACAACAATGC
ACTGGCCGGGGGCAACCAGGTGCATGGAGTGGCCAGGCCCCCAGTTGAAACCAATGAGGGCAAGACTCCCGCCCTGGGCG
GCGACCAGACCAAGCGGCTGCTTGATGCGCCGGACGATGAATCGCTCCAGGGCGTGCGCGACCGGGCGATACTCGCGGTG
CTGTTGTACCAAGGACTGCGCCGTGAAGAGTTGAGCCTGCTGCAGACCGGCGACCTGCAGGAGCGCCGTGGTGTAAAGCA
CCTGCGGATCCACGGCAAGGGCGGCAAGATCCGCTACCTGCCACTGCACCCGGTCGCGGCTGAACGGATCTACGTATACC
TGGTGCGTGATGGTGATCGAGCGCAGACGCCGGGTGCGCTTTTCCGCTCGCTGCGCGGCAAGACGTCAGGTACAGGGATT
ACCGGCAAGGGGGTTTATGGCGTTGTCAGTAAGTGGGCAAGCGCAGCGCAGATCCACGTGGACGGATTAGGCGTGCACGG
CCTGCGGGCCACGGCGGCGACCAACGCGCTTGAACATGATGCCGACATTGCCAAGGTGCAGATCTGGCTGGGGCACGCAA
ACATCAGCACGACGCGTTTGTATGATCGGCGCGGTCATCGACCGGAAGACTCTCCGACGTTTAAGGTCAAATACTGA

Protein sequence :
MSELVMANAGERRLTALEFQELASVPAAVEWFANIRNPRTRRAYQADLREFCSFVDLAGAEEFRVVNRAHVLAWRAQLER
RALSGATIRRKLATLASPFDYLLDNNALAGGNQVHGVARPPVETNEGKTPALGGDQTKRLLDAPDDESLQGVRDRAILAV
LLYQGLRREELSLLQTGDLQERRGVKHLRIHGKGGKIRYLPLHPVAAERIYVYLVRDGDRAQTPGALFRSLRGKTSGTGI
TGKGVYGVVSKWASAAQIHVDGLGVHGLRATAATNALEHDADIAKVQIWLGHANISTTRLYDRRGHRPEDSPTFKVKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xerD CAI36095.1 XerD-like site-specific recombinase Not tested PPHGI-1 Protein 4e-110 74