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Name : thiC (PSPPH_0535) Accession : YP_272837.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 628826 - 630715 bp Length : 1890 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGTACAACACTAAAAAATGCAGCCCATTTGAGCGAGTCGGCACAAGTCGATTCCGGATCGGTACAGCCGTTTACCCG TTCGCAGAAAATCTACGTTCAGGGCTCGCGCCCGGACATCCGCGTGCCGATGCGCGAAATCACTCTGGACGTCACACCGA CTGACTTCGGCGGTGAAATCAACGCGCCGGTCACGGTCTATGACACCTCCGGCCCGTACACCGACCCCAACGTGATCATC GACGTGCGTAAAGGCCTGGCGGATGTTCGCTCGCCGTGGATCGACTCGCGCAACGACACCGAGCGCCTGGCGGGCTTGAG TTCCAACTTCGGCCAGCAACGCCTGAGCGACGCCGAACTGACCGCGCTGCGCTTTGCTCATGTGCGCAACCCGCGCCGGG CCAACGCGGGGGCCAACGTCAGCCAGATGCACTATGCGCGTCAGGGCATCATTACCGCCGAGATGGAATACGTTGCCATC CGCGAAAACATGAAGCTTCAGGAAGCCCGTGCCGCAGGCCTGCGGACCCAGCAAAATGCCGGGCACAGCTTCGGCGCGAG CATCCCGAAGGAAATTACTGCCGAGTTCGTGCGCGAAGAGATCGCCCGTGGTCGCGCGATCATCCCGGCCAACATCAACC ACGTCGAACTGGAACCGATGATTATCGGCCGTAACTTTCTGGTAAAGATCAACGGCAACATCGGTAACAGCGCGCTGGGA TCTTCCATCGAAGAAGAAGTCGCCAAGCTGACCTGGGGCATTCGCTGGGGTTCTGACACGGTCATGGACCTGTCTACCGG CAAGCATATTCATGAAACCCGTGAATGGATCATCCGCAACTCGCCGGTGCCGATCGGCACTGTGCCGATCTATCAGGCTC TGGAAAAAGTCGGCGGTGCGGCCGAGGATCTGACCTGGGAGCTGTTCCGCGACACACTGATCGAGCAGGCCGAGCAGGGC GTTGATTACTTCACCATCCACGCCGGTGTGTTGCTGCGTTATGTGCCGCTGACCGCCAAGCGTGTGACCGGGATTGTCAG CCGTGGTGGTTCAATCATGGCCAAGTGGTGCCTGGCGCATCACCAGGAAAACTTCCTGTACACCCATTTCGAAGACATCT GCGAAATCATGAAGGCTTATGACGTCAGCTTCTCGCTGGGCGATGGCTTGCGTCCGGGCTCGATTGCCGACGCCAACGAT GCGGCGCAGTTCGGTGAGCTGGAAACCTTGGGTGAACTGACCAAGATCGCCTGGAAGCACGACGTGCAGACCATGATTGA AGGCCCCGGTCATGTGCCGATGCAGTTGATCAAGGAAAACATGGACAAGCAGCTGGAATGCTGCGACGAAGCGCCGTTTT ACACCCTTGGCCCGCTGACCACCGATATTGCGCCGGGGTATGACCACATCACGTCGGGCATCGGTGCCGCGATGATTGGC TGGTTCGGTTGCGCCATGCTGTGCTACGTCACGCCCAAAGAGCACCTGGGGCTGCCGAATAAGGATGACGTGAAGACCGG GATCATCACCTACAAGATTGCTGCCCACGCAGCGGACCTTGCCAAAGGCCATCCAGGGGCGCAGATCCGTGATAACGCCT TGAGCAAGGCGCGTTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTTGGCCTGGACCCGGACACCGCGCGCTCTTACCAC GACGAAACCCTGCCCAAGGACTCGGCCAAGGTCGCGCATTTCTGTTCCATGTGCGGGCCGAAATTCTGCTCGATGAAAAT CACTCAGGAAGTACGCGAGTACGCCGCCAACCAGCGGATCGAAGCAGTCGACGTCGATGTAGCCAAAGGCCTGGCCGAGC AGGCCGAGCGCTTCAAGCAGGAAGGCAGCCAGTTGTACAAGAAGGTGTAG Protein sequence : MSTTLKNAAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVII DVRKGLADVRSPWIDSRNDTERLAGLSSNFGQQRLSDAELTALRFAHVRNPRRANAGANVSQMHYARQGIITAEMEYVAI RENMKLQEARAAGLRTQQNAGHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADAND AAQFGELETLGELTKIAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYH DETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVDVAKGLAEQAERFKQEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 75 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 75 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
