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Name : amt2 (PSPPH_5001) Accession : YP_277086.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 5670163 - 5671500 bp Length : 1338 bp Strand : + Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGACTCTGCGTCAATTCGCAGGGCTCGGTGCCCTGTTGTCCCTCGCATTACCTGGTCTTGCCCTGGCGGCTGACCCAGT GGCCGAGCCGGTGCTGAACTCTGGCGACACTGCATGGATGCTGACCTCGACCGCTCTGGTCCTGTTCATGACCATCCCCG GTCTCGCGCTGTTCTACGGCGGTATGGTTCGCTCGAAGAATATTCTGTCCGTGATGATGCAGTGTTTCGCCATCACCGGT CTGATCAGCATCCTGTGGGTCGTGTACGGCTACAGCATTGCGTTCGATACAACCGGCATGGAAGCGGGCGTCGTCAACTT CAATTCCTTCTTTGGCGGTATGGGTAAAGCGTTCCTGGCAGGCATCACGCCAGCAAGCATTACCGGTCCTGCTGCGTTGT TCCCTGAGGCGGTGTTCGTCACCTTCCAGATGACCTTCGCGATCATTACCCCTGCCCTGATTGTCGGCGCTTTCGCAGAA CGCATGAAGTTCTCCGCAATGCTGGTGTTCATGGGTATCTGGTTCACTCTGGTCTACGCGCCAATCGCCCACATGGTCTG GGGTGGCGTCGGTGGCCTGATGTGGGACTGGGGCGTTCTCGACTTCGCTGGTGGCACCGTGGTGCACATCAACGCCGGTG TAGCCGGTCTGGTGGCCTGCCTGGTACTGGGCAAGCGCAAAGGCTTCCCGACCACGCCGATGGCACCGCACAACCTGGGT TATACCCTGATCGGCGCAGCAATGCTCTGGGTCGGCTGGTTCGGTTTCAACGCCGGTTCCGCCGCTGCGGCCAACGGCAC TGCCGGTATGGCGATGCTGGTGACTCAAATCGCTACCGCTGCCGCCGCACTGGGCTGGATGTTCGCCGAGTGGCTGACCC ACGGCAAGCCAAGCGCTCTGGGCATCGCGTCGGGCGTGGTTGCCGGTCTGGTCGCTATTACCCCGGCTGCCGGTACAGTC GGCCCGATGGGCGCTCTGATCATCGGTCTGGCGGCAGGCGTGATCTGCTTCTTCTGCGCTACCAGCCTCAAGCGCAAGCT TGGCTACGACGACTCCCTGGATGCGTTCGGCGTTCACGGTATCGGCGGTATCGTCGGCGCGATCCTGACCGGCGTGTTCG CAGCACCTGCACTGGGCGGCTTCGGCACTGTTACTGACATCGGTGCCCAGGTCTGGATTCAGTTCAAGGGCGTCGCGTTC ACCGTCGTTTACACCGCAATCGTGACCTTCATCATCCTTAAAGTCCTGGATGCTGTAATGGGTCTGCGGGTTACCGACGA GGAAGAGTCTGTCGGTCTGGACCTTGCGCAACACAACGAGCGTGGCTACAACTTGTAA Protein sequence : MTLRQFAGLGALLSLALPGLALAADPVAEPVLNSGDTAWMLTSTALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITG LISILWVVYGYSIAFDTTGMEAGVVNFNSFFGGMGKAFLAGITPASITGPAALFPEAVFVTFQMTFAIITPALIVGAFAE RMKFSAMLVFMGIWFTLVYAPIAHMVWGGVGGLMWDWGVLDFAGGTVVHINAGVAGLVACLVLGKRKGFPTTPMAPHNLG YTLIGAAMLWVGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWLTHGKPSALGIASGVVAGLVAITPAAGTV GPMGALIIGLAAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGGFGTVTDIGAQVWIQFKGVAF TVVYTAIVTFIILKVLDAVMGLRVTDEEESVGLDLAQHNERGYNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 3e-84 | 57 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 3e-84 | 57 |
