Gene Information

Name : PSPPH_4962 (PSPPH_4962)
Accession : YP_277048.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : prophage PSPPH06, DksA/TraR family C4-type zinc finger protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 5634156 - 5634365 bp
Length : 210 bp
Strand : -
Note : identified by match to protein family HMM PF01258; match to protein family HMM TIGR02419

DNA sequence :
ATGGTTTGCCCGTTCGATCGTGCGCAGGCTCTGGAGCAGCGACAGCGCGACCAGGCCATTGCGGCCCAGTTGGCCAAGCC
GCGAGCGAGCGGGCCGAGCCTCACCCATTGCCAGGACTGCGACAAGGAGATCCCACCGGCGCGCCAGGCGTTGGGCGGTA
TGACCCGTTGCGTGCCTTGCCAAACCCTGACCGAAAAAGGACGTCGCTGA

Protein sequence :
MVCPFDRAQALEQRQRDQAIAAQLAKPRASGPSLTHCQDCDKEIPPARQALGGMTRCVPCQTLTEKGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y2408 NP_669715.1 hypothetical protein Not tested HPI Protein 1e-04 43
YPTB1587 YP_070115.1 hypothetical protein Not tested HPI Protein 1e-04 43
unnamed CAA21401.1 - Not tested HPI Protein 1e-04 43
unnamed CAB46597.1 hypothetical protein Not tested HPI Protein 7e-05 43
STY4638 NP_458718.1 hypothetical protein Not tested SPI-7 Protein 0.018 42
t4331 NP_807925.1 hypothetical protein Not tested SPI-7 Protein 0.018 42
unnamed ABR13500.1 hypothetical protein Not tested PAGI-6 Protein 0.62 42