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Name : ssuB (PSPPH_4903) Accession : YP_276993.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Resistance Product : aliphatic sulfonate ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 5576357 - 5577169 bp Length : 813 bp Strand : - Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease DNA sequence : ATGACCAGTCTGAAACAGCAACCTCCACATTTGCTGCGCGGTATTCCGCTGGCAGTCCGCAACCTGAAAAAAGCGTTCGG CACTCGCGAAGTGCTCAAGGACATCGACCTGCATATTCCGGCCGGTCAGTTCGTCGCCATCGTCGGCCGTAGTGGCTGCG GTAAAAGTACCTTGCTGCGCCTGCTTGCCGGTCTCGACAAGCCAACCGAGGGTCAATTGCTTGCAGGTTCTGCACCACTG GACGACGCTCGCGAAGATACGCGTTTGATGTTCCAGGAGGCGCGGTTGCTGCCCTGGAAGAAGATCATCGACAACGTCGG CCTTGGCCTGAGCGGCGACTGGCGTGCGCAAGCACTCGAAGCGCTCGAGGCCGTCGGCCTTGCCGAACGCGCCAACGAGT GGCCAGCGGCATTGTCCGGTGGCCAGAAGCAGCGTGTTGCTCTGGCGCGTGCGCTGATTCACAAGCCGCGCCTGCTGTTA CTCGACGAACCACTGGGCGCGCTGGATGCCCTGACTCGGATTGAAATGCAGCAACTGATCGAAAAGCTCTGGCACCAATA CGGCTTTACGGTGCTGCTGGTCACCCATGATGTCAGCGAGGCCGTTGCCATCGCCGACCGGGTGATCCTGATCGAAGAAG GCCAGATCGGCTTAGACCTGTTGGTCGACCTGCCACGTCCGCGTGTTCGTGGTTCGCATCGCCTTGCAGCATTGGAGGCC GAAGTGCTCAACCGTGTGCTGGCCCTGCCGGGTTCACCACCTGACCCGGAACCGTTTTCGCCACTGCCCACGCAATTGCG CTGGGCAAATTAA Protein sequence : MTSLKQQPPHLLRGIPLAVRNLKKAFGTREVLKDIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDKPTEGQLLAGSAPL DDAREDTRLMFQEARLLPWKKIIDNVGLGLSGDWRAQALEALEAVGLAERANEWPAALSGGQKQRVALARALIHKPRLLL LDEPLGALDALTRIEMQQLIEKLWHQYGFTVLLVTHDVSEAVAIADRVILIEEGQIGLDLLVDLPRPRVRGSHRLAALEA EVLNRVLALPGSPPDPEPFSPLPTQLRWAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 5e-32 | 46 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-16 | 42 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-16 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-16 | 42 |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 1e-14 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssuB | YP_276993.1 | aliphatic sulfonate ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 3e-16 | 42 |
