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Name : PSPPH_4869 (PSPPH_4869) Accession : YP_276961.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Resistance Product : cadmium-translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.3 Position : 5536702 - 5538966 bp Length : 2265 bp Strand : - Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 DNA sequence : ATGGGTACGACGATCAAGAATTCCCCCGCACATGACCATGACCACGACCACGATCATGACCACGGCGAGCATGCGCCTGA GCAAAAGCCCGTAGAACATGCTCATGCATGCTGCTCCAGCGATGCACAACCTGCTGTGGTGACCTTTAACGATGCGCTGG CATCAGGTAGTCGCTTGAGCAGCTTTCGTATCGAAGCCATGGATTGCCCGACTGAGCAAACCCTAATCCAGAACAAGCTG GGCAAGCTTGCCGGGGTGCAGAAGCTTGAGTTCAACCTGATCAATCGCCTGCTGGGCGTCTGGCACGATCTGCCGTCCAC CGACCCGATTCGTGAGGCCATCAGTTCGCTGGGCATGCAGGCCGAGCCGGTCGAGGAGAGCGCAGCGTCTGATCAAGCGG CTCCGGTCGTGAAGAAACACTGGTGGCCGCTGGCATTGTCCGGCGTTACTGCACTGGGTGCTGAAGTGGTCCATTTGGCG TCACTCGGCCCGACCTGGGTCGTTGCTCTGCTGGCGCTGGTGTCGATCTTCAGTTGTGGGCTGACGACTTACAAGAAGGG CTGGATCGCGCTCAAGAACTTCAACCTGAATATCAATGCCCTGATGAGCATTGCGGTGACCGGTGCAATTCTGATCGGGC AGTGGCCTGAAGCGGCAATGGTGATGTTTCTGTTTACTGTGGCCGAGTTGATCGAAGCCAAGTCCCTCGACCGTGCGCGC AACGCAATCAGCGGGCTGATGCAGTTGACGCCAGAACTGGCCACCGTTAAACAGGCGGACGGCAGTTGGCAGGAAATTGA AGCTAAAAGCGTCGAAATTGGCGCTATTGTCCGCATCAAGCCAGGTGAGCGCGTAGGGCTCGACGGCGAGGTGGTGTCCG GTAACTCGACCATCGATCAAGCGTCGATCACAGGTGAAAGCCTGCCGGTCGAGAAGACTGTCGGCGACAAGGTATTCGCG GGCACTATCAATCAGGCGGGCTCGCTGGAATATCGTGTGACCGCTGCGGCGAACAATTCGACGCTGGCGCGCATCATCCA TGCGGTAGAAGCGGCTCAGGGTTCGCGTGCGCCGACCCAGCGCTTCGTCGACAGCTTCTCGCGCATCTATACGCCGGTGG TGTTCGTTGTCGCCTTGGGCGTGGCGCTGATTGCGCCGCTGTTTTTCGGCGGCGAATGGTTTGACTGGGTTTACCGCGCG CTGGTGTTGTTGGTAGTCGCTTGCCCCTGTGCGCTGGTGATTTCTACGCCGGTGACCATCGTCAGCGGTCTGGCGGCAGC GGCGCGCAAAGGCATCCTGATCAAGGGCGGCGTTTATCTGGAAATGGGCGAGAAGCTTGATTACCTTGCCCTCGACAAGA CCGGCACGCTGACCCACGGCAAGCCCGTGCAGACCGACTACGTGCCACTGGACCCGACGGTCGCCGACACTGCGCCGGCC ATTGCTGCGAGCCTTGCGGGTCGCTCCGATCACCCGGTTTCCCAGGCGATTGCCAAGGCGGCTGACAGCAGCCTGAAGCT GCATGAGGTCTCGGCGTTTGAAGCCTTGGGTGGACGCGGTGTGAAGGGTGCAATCAACGGCCAGATGTATCACCTGGGCA ACCATCGCCTGGTTGAAGAGCTGGGTCTGTGTTCGCCGGAGCTGGAGGCGAAGCTCGATGTTCTGGAAATGCAGGGCAAG ACCGTGGTGCTGTTGCTGGACACCTCCGGTCCGATCGCGCTGTTTGCGGTGGCTGACACTGTCAAGGAAACCAGCCTTGA AGCCATCGCTCAGTTGCATGAGCTGGGCATCAAAACGGTCATGCTGACTGGCGACAATCCGCACACCGCCAAGGCGATTG CCGATCAGGTCGGTATCGACGAAGCGCAAGGCAACTTGCTGCCTGCCGACAAGCTGAGTGCCATCGAGGCCCTTTATGCT CGCAACCACCGTGTAGGCGTGGTGGGTGACGGCATCAATGATGCACCGGCGCTGGCTCGGGCCGAGATTGGTTTTGCGAT GGCGGCAGCGGGTACTGATACTGCTATCGAGACGGCAGATGTCGCCCTGATGGACGATGATCTGCGCAAGATACCGACGT TCATTCGCTTGTCCCGTCGGACCTCGGCAGTGCTCAAGCAGAACATTGTTCTGGCAATCGCGACCAAGGTGTTGTTTATC GGCATCACGTTTGCGGGCATGGCGACCATGTGGATGGCTGTGTTTGCCGACATGGGCGTGAGTTTGCTGGTGGTGTTCAA CGGGCTGCGGCTGCTCAAAAAGTGA Protein sequence : MGTTIKNSPAHDHDHDHDHDHGEHAPEQKPVEHAHACCSSDAQPAVVTFNDALASGSRLSSFRIEAMDCPTEQTLIQNKL GKLAGVQKLEFNLINRLLGVWHDLPSTDPIREAISSLGMQAEPVEESAASDQAAPVVKKHWWPLALSGVTALGAEVVHLA SLGPTWVVALLALVSIFSCGLTTYKKGWIALKNFNLNINALMSIAVTGAILIGQWPEAAMVMFLFTVAELIEAKSLDRAR NAISGLMQLTPELATVKQADGSWQEIEAKSVEIGAIVRIKPGERVGLDGEVVSGNSTIDQASITGESLPVEKTVGDKVFA GTINQAGSLEYRVTAAANNSTLARIIHAVEAAQGSRAPTQRFVDSFSRIYTPVVFVVALGVALIAPLFFGGEWFDWVYRA LVLLVVACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEMGEKLDYLALDKTGTLTHGKPVQTDYVPLDPTVADTAPA IAASLAGRSDHPVSQAIAKAADSSLKLHEVSAFEALGGRGVKGAINGQMYHLGNHRLVEELGLCSPELEAKLDVLEMQGK TVVLLLDTSGPIALFAVADTVKETSLEAIAQLHELGIKTVMLTGDNPHTAKAIADQVGIDEAQGNLLPADKLSAIEALYA RNHRVGVVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPTFIRLSRRTSAVLKQNIVLAIATKVLFI GITFAGMATMWMAVFADMGVSLLVVFNGLRLLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 67 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 4e-123 | 43 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 3e-123 | 43 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 5e-120 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPPH_4869 | YP_276961.1 | cadmium-translocating P-type ATPase | BAC0298 | Protein | 0.0 | 67 |
