|
Name : glnA (PSPPH_4847) Accession : YP_276940.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 5508619 - 5510025 bp Length : 1407 bp Strand : + Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTTAAGTGGATTGATCTGCGCTTCACGGACACTAAAGGTACGCA GCACCACGTGACCATGCCAGCTCGCGATGCGCTGGAAGACGACTTCTTCGAAGTCGGCAAGATGTTCGACGGCTCCTCCA TCTCTGGCTGGAAAGGCATCGAAGCTTCCGACATGATTTTGCTGCCGGACGACGAAACCGCTGTTCTGGACCCGTTCACC GAAGAACCGACCCTGATCCTGGTGTGCGACATCATCGAACCGTCGACCATGCAAGGTTACGATCGTGACCCACGCGCCAT CGCTCGTCGCGCCGAGGAATACCTGAAGTCCACCGGTATCGGTGACACCGTATTCGCAGGCCCTGAGCCAGAATTCTTCA TCTTCGACGAAGTGAAATTCAAGTCCGACATCTCGGGTTCCATGTTCAAGATCTTCTCTGAACAAGGTTCGTGGATGTCC GACCAGGACGTGGAAGGCGGCAACAAAGGCCACCGCCCAGGCGTCAAAGGCGGTTACTTCCCGGTTCCGCCGTTTGACCA TGACCACGAAATCCGTACCGCCATGTGCAACGCTCTGGAAGAAATGGGCCAGACCGTTGAAGTTCACCACCACGAAGTGG CGACCGCTGGCCAGAACGAAATCGGCGTGAAATTCAACACGCTGGTTAAAAAGGCTGACGAAGTTCAGACCCTGAAATAC GTTGTTCACAACGTTGCTGACGCTTACGGCCGCACCGCGACCTTCATGCCAAAGCCTCTGTACGGTGATAACGGTTCAGG CATGCACGTGCACATGTCCATCGCCAAAGATGGCAAGAACACCTTCGCAGGTGAAGGCTATGCCGGTCTGTCCGACCTCG CTCTGTACTTCATCGGCGGCATCATCAAGCACGGCAAGGCGCTGAACGGCTTCACCAACCCGTCCACCAACTCGTACAAG CGTCTGGTTCCAGGCTTCGAAGCACCGGTCATGCTGGCCTACTCGGCGCGTAACCGTTCCGCTTCGATCCGTATTCCTTA CGTCAACAGCCCACGCGGCCGCCGTATCGAAGCACGCTTCCCGGATCCTTCGGCCAACCCGTACCTGGCCTTCGCGGCTC TGTTGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCTGGCGACGCAGCTGACAAGAACCTGTATGACCTGCCG CCTGAAGAGGCCAAAGAGATCCCACAAGTTTGCGGCAGCCTGAAAGAAGCGCTGGAAGAACTGGACAAGGGCCGTGCGTT CCTGACCAAAGGCGGCGTGTTCAGCGACGACTTCATCGACGCTTACATCGCACTGAAAAGCGAAGAAGAAATCCGCGTTC GTACCTTCGTACACCCACTGGAATACGAGCTGTACTACAGCTGCTGA Protein sequence : MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALEDDFFEVGKMFDGSSISGWKGIEASDMILLPDDETAVLDPFT EEPTLILVCDIIEPSTMQGYDRDPRAIARRAEEYLKSTGIGDTVFAGPEPEFFIFDEVKFKSDISGSMFKIFSEQGSWMS DQDVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTAMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQTLKY VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIAKDGKNTFAGEGYAGLSDLALYFIGGIIKHGKALNGFTNPSTNSYK RLVPGFEAPVMLAYSARNRSASIRIPYVNSPRGRRIEARFPDPSANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP PEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIRVRTFVHPLEYELYYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 1e-105 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_276940.1 | glutamine synthetase, type I | VFG1399 | Protein | 1e-102 | 50 |
