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Name : PSPPH_4689 (PSPPH_4689) Accession : YP_276792.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ISPsy18, transposase, truncated Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 5323901 - 5324980 bp Length : 1080 bp Strand : + Note : identified by match to protein family HMM PF00872 DNA sequence : TTGCAGGCAGCCTGGCTCCAGGCCGTTGAGGGGTCGACCAATCAGCGCAATGGCAAAAGCAGCAAGACGGTTCTGACCGA CGACGGGCCGCTTCGCCTGGATATCCCCAGAGACCGCGATGGTAGCTTCGCCCCGATCCTGATTCCCAAGCACGAACGCC GTTTTACAGGCTTCGACGACAAGATAATTGCCATGTACGCCCGGGGCATGACGGTGCGTGAGATCCGCGCTTTTCTATCT GAGCAGTATGGAACTGACGTGTCCCATGACTTCATCAGCTCAGTCACCGATGCGGTCATGGAAGAGGTGGGCGCTTGGCA GCAACGACCCTTGGAACCGATGTATCCGGTGATCTTCTTCGATGCGTTACGGGTCAAAATCCGGGACGAGGGGTTAGTGT GCAACAAGGCTATTTATCTGGCGCTGGGGGTATTACCTGATGGCACGCGCGACATTCTGGGTATATGGATCGAGAGCACC GAGGGTGCCAAGTTTTGGATGAAGGTGTTCAACGACCTCAAGACTCGTGGCGTTGAAGATGTTCTGATCGCCGTCACGGA TGGCCTCAAAGGAATACCGGAGGCGTTGGGGGCGGTTTTTCCTGCCACGACGCTGCAAACCTGCATCGTGCATCTGATCC GCAACAGCTTGGACTATGCCGCTTGGGATAAACGTCGGGCACTGGCCAAAGCACTCAAGCCGATCTACCAGGCGATCAAT GCCGATGTGGCTGAGCAAGAGCTTAACGCCTTTGAAGCGGGCCCCTGGGGCAAGCAGTATCCGACTGTAGTTGCTGCATG GCGTCGCGCCTGGGATCGGGTTATACCGTTTTTTGTTTTTCCGGCGGGCATTCGCAAAGTGGTTTACACGACCAATGCCA TCGAGAGCATCAATGCCCAGTTACGCAAGATCATCAAGACTCGAGGGCACTTCCCGACCGATGAGGCTGCGACGAAACTG ATATGGCTTGGGTTGCGCAACATCACCGCCAACTGGGGTCATGCGGCACACGACTGGAAAGTGGCAATGAATCAATTTGC GATCCTGTACGGAGACCGATTTACCAGACCGAGCTGGTAA Protein sequence : MQAAWLQAVEGSTNQRNGKSSKTVLTDDGPLRLDIPRDRDGSFAPILIPKHERRFTGFDDKIIAMYARGMTVREIRAFLS EQYGTDVSHDFISSVTDAVMEEVGAWQQRPLEPMYPVIFFDALRVKIRDEGLVCNKAIYLALGVLPDGTRDILGIWIEST EGAKFWMKVFNDLKTRGVEDVLIAVTDGLKGIPEALGAVFPATTLQTCIVHLIRNSLDYAAWDKRRALAKALKPIYQAIN ADVAEQELNAFEAGPWGKQYPTVVAAWRRAWDRVIPFFVFPAGIRKVVYTTNAIESINAQLRKIIKTRGHFPTDEAATKL IWLGLRNITANWGHAAHDWKVAMNQFAILYGDRFTRPSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 9e-82 | 49 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 4e-80 | 48 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 8e-90 | 45 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 5e-77 | 45 |
| c5176 | NP_757024.1 | transposase | Not tested | PAI II CFT073 | Protein | 7e-56 | 44 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 8e-78 | 44 |
