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Name : PSPPH_4666 (PSPPH_4666) Accession : YP_276771.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 5301864 - 5303384 bp Length : 1521 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : ATGCGTTACGCTCATCCCGGTACCGAAGGCGCTATCGTCAATTTCAAGGAACGCTACGGTAACTATATCGGCGGCGAGTT CGTCGCACCGGTCAAAGGCCAGTACTTCACCAACACCTCGCCCGTCACCGGCAAGGCCATCGCCGAATTTCCGCGCTCCA CTGCCGAAGATATCGAAAAGGCCCTCGACGCTGCGCACGCAGCCGCTGCAGCCTGGGGCTCGACCTCAGTGCAGGCACGC TCGCTGGTGCTGCTGAAGATTGCCGATCGTATTGAAGCCAATCTCGAAGTCCTGGCCATCACCGAAACCTGGGACAACGG CAAAGCGATCCGCGAAACCCTCAACGCTGATATCCCGCTCGCCGCCGATCACTTCCGCTACTTCGCTGGCGTGCTGCGTG CTCAGGAAGGCAGCGCTGCCGAAATCGACGGTAATACTGTTGCCTATCACATTCATGAGCCGCTGGGCGTGGTCGGGCAG ATCATCCCGTGGAACTTCCCGCTCCTGATGGCCGCCTGGAAGCTCGCTCCTGCGCTGGCTGCCGGTAACTGCATCGTGCT CAAGCCAGCCGAACAGACCCCGTTGGGGATCAGCGTGCTGATCGAACTGATCGGCGATCTGCTGCCTCCCGGCGTGCTGA ACATCGTGCAGGGTTATGGTCGCGAGGCAGGCGAAGCGCTGGCCAGCAGCAAGCGCATCGCCAAAATCGCTTTCACCGGC TCGACCCCGGTCGGCTCGCACATCATGAAACTGGCGGCGGACAACATCATCCCGTCCACCGTGGAACTGGGCGGCAAGTC GCCGAACATCTTCTTCGAAGACATCATGAGCGCCGAACCAGAGTTCATCGATAAGGCTGCCGAAGGCCTGGTGCTGGCAT TTTTCAATCAGGGCGAAGTCTGCACATGCCCGTCCCGCGCACTGGTGCAGGAGTCGATCTATCCACAGTTCATGGAAGCG GTGATGCGCAAGGTCGAGAAGATCAAGCGCGGCGACCCTCTGGACACTGACACCATGGTCGGCGCTCAGGCATCCGAGCA ACAATTCGACAAGATTCTTTCGTATCTGGACATCGCCAAGGGCGAAGGCGCCGAGCTGCTGACCGGCGGCAAGGTCGAGA AGCTTGAGGGCAGCCTGTCCACTGGCTACTACATCCAGCCGACGCTGCTCAAAGGCAACAACAAGATGCGTGTGTTCCAG GAAGAAATCTTCGGCCCGGTGGTCAGCGTCACGACCTTCAAGGACGAAGCAGAGGCTGTGGCCATCGCCAACGACACCGA GTTCGGCCTGGGCGCAGGCTTGTGGACCCGCGACATCAACCGCGCCTACCGCGTGGGCCGGGCGATCAAGGCCGGGCGAG TCTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCATTCGGTGGCTACAAGAAGTCCGGCGTCGGTCGCGAAACC CACAAAATCGCGCTTGAGCACTACCAACAGACCAAAAACCTGCTGGTGAGCTACGACACCAACCCGTTGGGTTTTTTCTA G Protein sequence : MRYAHPGTEGAIVNFKERYGNYIGGEFVAPVKGQYFTNTSPVTGKAIAEFPRSTAEDIEKALDAAHAAAAAWGSTSVQAR SLVLLKIADRIEANLEVLAITETWDNGKAIRETLNADIPLAADHFRYFAGVLRAQEGSAAEIDGNTVAYHIHEPLGVVGQ IIPWNFPLLMAAWKLAPALAAGNCIVLKPAEQTPLGISVLIELIGDLLPPGVLNIVQGYGREAGEALASSKRIAKIAFTG STPVGSHIMKLAADNIIPSTVELGGKSPNIFFEDIMSAEPEFIDKAAEGLVLAFFNQGEVCTCPSRALVQESIYPQFMEA VMRKVEKIKRGDPLDTDTMVGAQASEQQFDKILSYLDIAKGEGAELLTGGKVEKLEGSLSTGYYIQPTLLKGNNKMRVFQ EEIFGPVVSVTTFKDEAEAVAIANDTEFGLGAGLWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET HKIALEHYQQTKNLLVSYDTNPLGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-146 | 65 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-154 | 64 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-154 | 64 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-154 | 64 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-153 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPPH_4666 | YP_276771.1 | aldehyde dehydrogenase | VFG0082 | Protein | 9e-147 | 65 |
