Gene Information

Name : fecE (PSPPH_4633)
Accession : YP_276738.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5270614 - 5271405 bp
Length : 792 bp
Strand : +
Note : Part of the FecBCDE citrate-dependent iron (III) transport system

DNA sequence : 
ATGAGTATTCTGAAGGCGCAGCAACTCGACATCGGCTATGGCGCAACGCGGATCGTGCAAGACCTGTCATTCAGCCCGCC
GCCCGCGCAGGTCACGGCGCTGATCGGCCCCAACGGTTGCGGCAAATCCACACTGCTCAAAGCGTTTGCCCGAATTCTCA
CCCCGCAATCGGGCAGCCTCAGCCTGGACGGCAAGGCCTACAGCCAGCTCTCCGCCAAAGAGCTGGCCCGCAAGGTGGCT
TTTCTGCCGCAAGTGCTGCCCATTCCGGAAGGCGTCAGTGTGCGTCAACTGGTGGCTTATGGTCGCAGCCCGCACAACAG
CATGTGGGGACGCTTGAGCGGGGCCGATCAGCACAGTGTCGAGCAGGCCCTGCAACGCATGGAGTTGGAAACCCTGGCCG
AACGGCCGCTGTCCGACCTTTCCGGCGGGCAGCGCCAACGAGCGTGGCTGGCGATGATCCTCGCGCAGGACGCCGCCATC
GTCCTGCTCGACGAGCCCACCACGTATCTGGACATCAGCCATCAGGTCGAACTGCTGGACCTGATGCGCGAACTCAGCGC
CGAAGGTAAAACCGTGATTACCGTGCTGCACGACATCAATCAGGCCTGTCGCTATGCCGACCACCTGGCGGTCATGCAGG
GTGGACGTCTGGTGACCTGCGGCGCGCCGGGCGAGGTGCTGACAGCCGAGCTGGTCTGCCAGGTGTTCGATGTGCAGGTG
CAGATCATGCGCGAACCCGTGGCCGGTACGCCGATGTGCATCGTCGAGCGCAGCACGCGCTGCACCAGTTAG

Protein sequence : 
MSILKAQQLDIGYGATRIVQDLSFSPPPAQVTALIGPNGCGKSTLLKAFARILTPQSGSLSLDGKAYSQLSAKELARKVA
FLPQVLPIPEGVSVRQLVAYGRSPHNSMWGRLSGADQHSVEQALQRMELETLAERPLSDLSGGQRQRAWLAMILAQDAAI
VLLDEPTTYLDISHQVELLDLMRELSAEGKTVITVLHDINQACRYADHLAVMQGGRLVTCGAPGEVLTAELVCQVFDVQV
QIMREPVAGTPMCIVERSTRCTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-68 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-55 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-55 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-55 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-55 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-54 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-51 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-51 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_276738.1 iron-dicitrate transporter ATP-binding subunit BAC0164 Protein 3e-68 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_276738.1 iron-dicitrate transporter ATP-binding subunit VFG1042 Protein 3e-68 53
fecE YP_276738.1 iron-dicitrate transporter ATP-binding subunit VFG0925 Protein 7e-59 47