Gene Information

Name : fecD (PSPPH_4632)
Accession : YP_276737.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 5269641 - 5270609 bp
Length : 969 bp
Strand : +
Note : identified by match to protein family HMM PF01032

DNA sequence : 
ATGAACCAGCCCCGCCAACGGCTGTTGTTGCTGATTTTGTTGCTGGCACTGGCCGTGCTGCTGAGCCTCAGCGCGGGCAC
CGTCTGGCTGACGCCCGGTGCAGTGCTTGATCACCTGATCGCCCACGACAGCAAGGATTTCGAGGTCTGGAATCACCGTC
TGCCACGCGGTTTGATCGCAATCATGACCGGCTGCGCCTTCGGCCTGGCGGGCGCCATTGTTCAAGGCGTGATCCGCAAC
CCGCTGGCCTCGCCGGAAATTCTTGGCGTAACACAGGGCGCAGGGCTGGCGTTGACCATCGCCATCATCGGCCTGCCGCA
ATTACCGGTGTCCGCGCTGCCGTTTGTGGCGTGTCTGGGCGGCGCGGCAGGTGCGCTGCTGCTGGCGTTGTATAACACCG
GCGTGCAGTTTTCCGGCGTGCGTTTCGCGCTCTCCGGAGTGGCGATTGCGGTGACGCTGTCGAGCATCACCGAATTTCTG
ATTCTGTCCAACCCGCTGGATATCAATACCGCCCTGCTGGCCCTGACCGGCAGTTTGTGGAGCCGTAACTGGCACCATGT
GTGGCTGGCCTCGCCGCTTCTGCTGTTGATCCCGCTCAGCTTGCTGCTGGCCAAACCGCTGAACCTGATCGGCCTGGGCG
ATGAAGCAGCGCAGAGCCTGGGCACCGGCCTCAAACGTACGCGCTGGCTGGCAATGGGCAGTGCCGTGCTGTTGACCAGC
CTGGGCGTGGGCATCATCGGTCCGGTGAGTTTTGTCGGGCTGGTCGCGCCACACATGGCCCGCCGTCTGGTCGGCGGTCA
TCATCAATACCTGCTGCCCGCCTCCATGGTATTGGGCGCGTTATTGCTGGTGCTGGCCGATACGCTGGGGCGCACATTGA
TCGCCCCCAGCGAGATCCCCGCCGGTATTCTCACGGCGGTGATCGGCGCTCCGTATTTCCTCTGGCTGCTGGCCCGATTC
AAAGGTTGA

Protein sequence : 
MNQPRQRLLLLILLLALAVLLSLSAGTVWLTPGAVLDHLIAHDSKDFEVWNHRLPRGLIAIMTGCAFGLAGAIVQGVIRN
PLASPEILGVTQGAGLALTIAIIGLPQLPVSALPFVACLGGAAGALLLALYNTGVQFSGVRFALSGVAIAVTLSSITEFL
ILSNPLDINTALLALTGSLWSRNWHHVWLASPLLLLIPLSLLLAKPLNLIGLGDEAAQSLGTGLKRTRWLAMGSAVLLTS
LGVGIIGPVSFVGLVAPHMARRLVGGHHQYLLPASMVLGALLLVLADTLGRTLIAPSEIPAGILTAVIGAPYFLWLLARF
KG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 2e-32 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecD YP_276737.1 iron ABC transporter permease BAC0163 Protein 1e-32 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecD YP_276737.1 iron ABC transporter permease VFG1043 Protein 9e-33 49