Gene Information

Name : nrdR (PSPPH_4508)
Accession : YP_276624.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : transcriptional regulator NrdR
Function : -
COG functional category : K : Transcription
COG ID : COG1327
EC number : -
Position : 5141468 - 5141932 bp
Length : 465 bp
Strand : -
Note : identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244

DNA sequence :
ATGCACTGTCCCTTCTGCGGTGCCAATGACACCAAAGTCATCGACTCCCGCCTCGTCGCCGAAGGCGAGCAAGTACGCCG
CCGACGCGAGTGTCTGGCCTGCGGCGAGCGCTTCACGACGTTCGAAACTGCCGAGCTGGTTTTGCCGCGTCTGATCAAAC
AGGATGGCAGTCGTCAGCCTTTCGATGAAGAAAAACTGCGCGCCGGTATGCAACGTGCGCTTGAAAAGCGTCCGGTGAGT
GTCGAGCGCCTTGAGGCGGCACTGGTGCACATCAAGCACAAGCTGCGAGCGACCGGCGAGCGCGAAGTCAAATCGCTGGT
GGTTGGCGAACTGGTCATGGCCGAGCTGCAAAAGCTCGATGAAGTGGCCTACATCCGCTTCGCCTCGGTGTACCGCCGCT
TTCAGGACCTCAACGAATTTCGTGAAGAAATCGACCGTCTGGCCCGCGAGCCGGGTAAGGAATAA

Protein sequence :
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQPFDEEKLRAGMQRALEKRPVS
VERLEAALVHIKHKLRATGEREVKSLVVGELVMAELQKLDEVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00288 YP_008207753.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR25 Protein 2e-42 60
BJAB0868_00292 YP_008211618.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR26 Protein 2e-42 60