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Name : ribD (PSPPH_4507) Accession : YP_276623.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 5140326 - 5141462 bp Length : 1137 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : TTGCTGACTGAACTGGCGGCTCTCGACGTTCATTACATGGCGCGTGCGCTGGAGCTGGCGCGTAACGGGCTCTACTCCAC GCACCCCAACCCGCGCGTCGGCTGCGTTATTGTGCGTGACGGCCAGATCGTCGGTGAGGGCTGGCATGTACGGGCTGGCG AGCCGCATGCCGAAGTGCATGCCCTGCGCCAGGCCGGCGAACTTGCCAGAGGCGCGACCGCCTACGTCACCCTTGAACCG TGCAGCCATCAGGGGCGCACGCCGCCCTGTGCCGATGCGCTGGTCAACGCCGGGCTGGCGCGGGTCGTCGCGGCCATGCA GGACCCCAACCCTGAAGTGTCCGGTCGTGGCCTGTTGCGCCTGATGAATGCCGGTATCGGCGTTCAGTGCGGCGTGCTGG AAAGCGAAGCGCGAGCGCTGAACAAAGGCTTTCTCAAGCGCATGGAAACCGGACAGCCCTACATACGCGTGAAGATGGCC ATGAGCCTGGATGGCCGAACCGCTATGGCCAGCGGCGAAAGCCAGTGGATCACCGGTCCCGAGGCGCGTTCCGCCGTTCA GCGTCTGCGCGCGCAGTCGAGCGTAGTGCTGACCGGAGCCGATACGGTGCTGGCCGACAAGGCCCGCCTCACCGTGCGCC CCGATGAGTTGGGTCTCAATGCAGAATTGACCGCGCTGGCCGCTGCGCGTCCGCCCCTGCGGGTATTGATTGACGGTCGT CTGCGCGTACCGCTGGACGCGCCGTTCTTTCAGGCGGGCAGTGCGCTGGTCGTGACCTGTGCTGCGGCGTCGGCGCGAGG TCGCTATCAGGAAGAAGGCCACGAAATGCTGGCACTGGCTGACAGCGCCGGTCATGTGGACCTGCGCAAGTTGATGGGCG AACTGGCCACGCGTGGTGTCAATGAAGTGCTGGTCGAAGCCGGTCCGCGGCTGGCGGGTGCCTTTGCGCGTCTCGGGCTG GTCGACGAGTTTCAGATATTCATTGCCGGCAAGTTTCTCGGCTCATCGGCCCGGCCGTTGCTCGACCTGCCGCTGGCGCA GATGAGCGAAGCGCTGGAGCTGAACATCGTGCAAATGCGTGCCGTCGGTAATGACTGGCGAGTCATCGCTCTCCCTGTGC GCGCACCCGGCGTATAA Protein sequence : MLTELAALDVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGELARGATAYVTLEP CSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGVQCGVLESEARALNKGFLKRMETGQPYIRVKMA MSLDGRTAMASGESQWITGPEARSAVQRLRAQSSVVLTGADTVLADKARLTVRPDELGLNAELTALAAARPPLRVLIDGR LRVPLDAPFFQAGSALVVTCAAASARGRYQEEGHEMLALADSAGHVDLRKLMGELATRGVNEVLVEAGPRLAGAFARLGL VDEFQIFIAGKFLGSSARPLLDLPLAQMSEALELNIVQMRAVGNDWRVIALPVRAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 8e-63 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 8e-63 | 47 |
