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Name : PSPPH_4335 (PSPPH_4335) Accession : YP_276452.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ISPsy18, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 4956146 - 4957405 bp Length : 1260 bp Strand : - Note : identified by match to protein family HMM PF00872 DNA sequence : ATGCCGACCAAAAAGAAGTCCGCCAATGCAACAGCGAGGGAGTTGCCCTCGATTCCCCAAGAGCTGATCGAGCAGTTTGT TAAAGGCCCGATGAGCGCCGAAGCCATTCAAGACGCGTCCATGGCGTTCAAGAAGGCTCTGATCGAGCGTGCGCTAGGCG CCGAGCTGGGTCACCACCTTGGTTACCCTCAGGGCGCGGAGCGCCCTGAGGGGGCGACCAATCAGCGCAATGGCAAAAGC AGCAAGACGGTTCTGACCGACGACGGGCCGCTTCGCCTGGATATCCCCAGAGACCGCGATGGTAGCTTCGCCTCGATCCT GATTCCCAAGCACGAACGACGTTTTACAGGCTTCGACGACAAGATAATTGCCATGTACGCCCGGGGCATGACGGTGCGTG AGATCCGCGCTTTTCTATCTGAGCAGTATGGAACTGACGTGTCCCATGACTTCATCAGCTCAGTCACCGATGCGGTCATG GAAGAGGTGGGCGCTTGGCAGCAACGACCCTTGGAACCGATGTATCCGGTGATCTTCTTCGATGCGTTACGGGTCAAAAT CCGGGACGAGGGGTTAGTGTGCAACAAGGCTATTTATCTGGCGTTGGGGGTATTACCTGATGGTACGCGCGACATTCTGG GTATATGGATCGAGAGCACCGAGGGTGCCAAGTTTTGGATGAAGGTGTTCAACGACCTCAAGACTCGTGGCGTTGAAGAT GTTCTAATCGCCGTCACGGATGGCCTCAAAGGAATACCGGAGGCGTTGGGGGCGGTTTTTCCTGCCACGACGCTGCAAAC CTGCATCGTGCATCTGATCCGCAACAGCTTGGACTATGCCGCTTGGGATAAACGTCGGGCACTGGCCAAAGCACTCAAGC CGATCTACCAGGCGATCAATGCCGATGTGGTTGAGCAAGAGCTTAACGCCTTTGAAGCGGGCCCCTGGGGCAAGCAGTAT CCGACTGTAGTTGCTGCATGGCGTCGCGCCTGGGATCGGGTTATACCGTTTTTTGTTTTTCCGGCGGGCATTCGCAAAGT GGTTTACACGACCAATGCCATCGAGAGCATCAATGCCCAGTTACGCAAGATCATCAAGACTCGAGGGCACTTCCCGACCG ATGAGGCTGCGACGAAACTGATATGGCTTGGGTTGCGCAACATCACCGCCAACTGGGGTCATGCGGCACACGACTGGAAA GTGGCAATGAATCAATTTGCGATCCTGTACGGAGACCGATTTACCAGACCGAGCTGGTAA Protein sequence : MPTKKKSANATARELPSIPQELIEQFVKGPMSAEAIQDASMAFKKALIERALGAELGHHLGYPQGAERPEGATNQRNGKS SKTVLTDDGPLRLDIPRDRDGSFASILIPKHERRFTGFDDKIIAMYARGMTVREIRAFLSEQYGTDVSHDFISSVTDAVM EEVGAWQQRPLEPMYPVIFFDALRVKIRDEGLVCNKAIYLALGVLPDGTRDILGIWIESTEGAKFWMKVFNDLKTRGVED VLIAVTDGLKGIPEALGAVFPATTLQTCIVHLIRNSLDYAAWDKRRALAKALKPIYQAINADVVEQELNAFEAGPWGKQY PTVVAAWRRAWDRVIPFFVFPAGIRKVVYTTNAIESINAQLRKIIKTRGHFPTDEAATKLIWLGLRNITANWGHAAHDWK VAMNQFAILYGDRFTRPSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-85 | 46 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 4e-84 | 44 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 4e-95 | 43 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 1e-81 | 43 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 4e-80 | 42 |
