Gene Information

Name : PSPPH_3934 (PSPPH_3934)
Accession : YP_276070.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 4494757 - 4495638 bp
Length : 882 bp
Strand : -
Note : identified by match to protein family HMM PF01522

DNA sequence :
ATGGCCAAAGAAATTCTGTGTGCGTTTGGTGTGGATGTAGATGCGGTAGCGGGCTGGCTGGGCTCCTATGGCGGCGAGGA
TTCGCCGGACGACATTTCCCGCGGCCTGTTCGCCGGTGAAGTCGGCGCTCCGCGTCTGCTCAAGCTGTTCGAGCGTTACG
GTCTGCGCACCACCTGGTTCATTCCGGGGCACTCCATGGAGACCTTCCCCGAGCAGATGAAAGCCGTGGCGGATGCCGGG
CATGAAATCGGTGTGCATGGTTACAGCCATGAAAACCCGATTGCGATGACCCCGGAGCAGGAAGAGATCGTCCTCGACAA
GTCCATTGAACTGATCACGCAAATGACCGGCAAACGCCCGACCGGCTATGTCGCGCCATGGTGGGAGTTCAGCAACGTCA
CCAACGAGCTGCTGCTTAAGAAAGGCATCAAGTACGACCACAGCCTGATGCACAACGACTTCCACCCTTACTACGTTCGG
GTGGGCGACAAGTGGACCAAAATCGATTACAGCCAGCATCCGGATACCTGGATGAAGCCGCTGGTACGTGGCGAAGAAAC
CGATCTGGTGGAAATTCCGGCCAACTGGTACCTGGACGATCTGCCGCCAATGATGTTCATCAAGAAGGCACCCAACAGCC
ACGGTTTCGTGAACCCTCGACATCTGGAGGAGATGTGGCGCGACCAGTTCGACTGGGTCTATCGCGAACACGAACACGCT
GTATTCACCATGACCATTCACCCGGACGTGTCTGGTCGCCCGCAAGTGCTGCTGATGCTGGAGCGCTTGATCGAGCACAT
TCAAAGCCATGCAGGCGTCAAGTTCGTCACTTTCGACGAGATTGCCGACGACTTCGTGCGTCGTAACCCCCGTACCCGTT
GA

Protein sequence :
MAKEILCAFGVDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGAPRLLKLFERYGLRTTWFIPGHSMETFPEQMKAVADAG
HEIGVHGYSHENPIAMTPEQEEIVLDKSIELITQMTGKRPTGYVAPWWEFSNVTNELLLKKGIKYDHSLMHNDFHPYYVR
VGDKWTKIDYSQHPDTWMKPLVRGEETDLVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHEHA
VFTMTIHPDVSGRPQVLLMLERLIEHIQSHAGVKFVTFDEIADDFVRRNPRTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 6e-125 87