Name : PSPPH_3581 (PSPPH_3581) Accession : YP_275729.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ISPsy2, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 4125948 - 4126928 bp Length : 981 bp Strand : - Note : identified by match to protein family HMM PF01609 DNA sequence : ATGAAACAGATGACCTTCGCCGACGCCGAGTATGCCGGCAAGCGCAAGCAGACCCGTAAGGAATTGTTCCTGATCGAGAT GGATCAGGTGGTGCCCTGGAAAGGTTTGATTGCCCTGATTGAGCCCTATTATCCAAAAGGAGAAGGTGGCCGGCCCGCCT ACCCACTGATGGCGATGCTGCGTGTTCATCTGATGCAGAACTGGTTCGGCTACAGCGATCCGGCGATGGAAGAAGCGCTG TATGAGACGACTATCCTGCGTCAGTTTTCAGGCCTGAGCCTGGAGCGAATTCCAGACGAAACCACCATTCTCAACTTCCG TCGTCTGCTGGAAAAGCACGAGTTGGCGACCGGGATTCTCGGCGTAATTAATGGTTATCTGGGCGACCATGGCTTGTCGT TGCGTCAAGGCACCATCGTCGATGCCACGCTGATTCACGCGCCCAGTTCGACCAAGAACAAGGATGGCAAACGCGATCCT GAGATGCATCAAACCAAGAAAGGTAACCAGTACTATTTCGGCGCTAAGGCTCACATCGGCGCCGACGACGAGTCAGGCCT GGTGCACAGCGTGGTAGTAACAGCGGCCAATGTGGCAGACGTCACGCAGGTTGCCAAACTGCTGCACGGCGAGGAAAACG TAGTCTGCGCCGACGCAGGTTACACCGGGGTCGAGAAGCGCGAAGAACACGCTGGGCGCAAGGTCATTTGGCAGATTGCC GCCCGCCACAGCACTTACAAAAAGCACGGAAAACGCAGTATTTTGTACAAGGCGATCCGCAAAATCGAGAAGGCCAAGGC CCAGGTTCGCGCCAAGGTCGAGCATCCGTTTCGGGTCATCAAACGCCAGTTTGGCTATGAAAAAGTGCACTTTCGGGGCT TGGCCAAGAACACCGCGCAGATGGTGACGTTGTTCGCCCTGTCAAACCTGTGGATGGCCCGTCGACATTTGTTGGCGAGC GCAGGAGAGGTGCGCGTGTAA Protein sequence : MKQMTFADAEYAGKRKQTRKELFLIEMDQVVPWKGLIALIEPYYPKGEGGRPAYPLMAMLRVHLMQNWFGYSDPAMEEAL YETTILRQFSGLSLERIPDETTILNFRRLLEKHELATGILGVINGYLGDHGLSLRQGTIVDATLIHAPSSTKNKDGKRDP EMHQTKKGNQYYFGAKAHIGADDESGLVHSVVVTAANVADVTQVAKLLHGEENVVCADAGYTGVEKREEHAGRKVIWQIA ARHSTYKKHGKRSILYKAIRKIEKAKAQVRAKVEHPFRVIKRQFGYEKVHFRGLAKNTAQMVTLFALSNLWMARRHLLAS AGEVRV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 4e-138 | 92 |
tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 6e-98 | 80 |
PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 7e-98 | 80 |
unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 2e-66 | 61 |
tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-57 | 49 |
tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-57 | 49 |