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Name : PSPPH_3575 (PSPPH_3575) Accession : YP_275723.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : major facilitator family transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4118871 - 4120184 bp Length : 1314 bp Strand : - Note : identified by match to protein family HMM PF07690 DNA sequence : ATGAGCCAGGAACTGCGGCTTATACGCCGCATTACGTTCAAACTGATTCCATTTCTTATCCTGCTTTACCTGATCGCTTA TGTGGACCGCTCTGCCGTGGGCTTTGCCAAGCTGCACATGGGCGCCGACATCGGTATCGGCGACGCGGCCTACGGGCTGG GTGCCGGGCTGTTTTTCATCGGCTACTTCCTGTTTGAAATCCCCAGCAACCTGATGCTCGAGCGTTTTGGCGCACGCCGC TGGTTCGCACGAATCATGATCACCTGGGGCGCAATCACCATCGGCATGGCCTTCGTACAAGGGCCACACAGCTTCTATGT GATGCGTTTTCTGCTCGGTGCTGCCGAGGCGGGCTTCTTTCCCGGTGTGCTGTACTACATCACCCAGTGGTTTCCGGTGC GCCATCGCGGCAAGATCCTTGGCCTTTTCATCCTCTCGCAACCCATCGCCATGATGATCACCGGGCCGGTGTCCGGTGGT TTGCTGGGCATGGACGGCATACTCGGCCTGCATGGCTGGCAATGGCTGTTCATCGTCATCGGCACGCCAGCGATTCTGCT GACCTGGCCGGTGCTGCGCTGGTTGCCGGACGGTCCGCAACAGGTCAAATGGATGGACCAGACCGAGAAAGACTGGCTGA CCGGTGAGCTGAAAAAGGACCTGGAAGAATACGGCCAGACCCGCCACGGCAATCCGTTGCACGCCTTGAAAGACAAGCGT GTGTTGCTTCTCGCGCTGTTCTATCTGCCAGTGACCTTAAGTATCTACGGTCTGGGCCTGTGGCTGCCGACGCTGATCAA ACAGTTCGGTGGCAGTGATCTGACCACCGGCTTTGTGTCTTCGGTGCCGTACATTTTCGGCATCATTGGCCTGCTGATCG TGCCGCGCAGTTCCGACCGTCTCAACGACCGTTACGGGCATCTGGCCGTGCTGTATGTGTTGGGGGCCATCGGCCTGTTC TGCAGTGCCTGGCTGACCCTGCCGGTGGCGCAGCTGGCTGCACTGTGCGTCGTGGCGTTTGCGCTGTTCTCCTGCACGGC GGTGTTCTGGACATTGCCAGGGCGGTTCTTTGCCGGTGCCAGTGCCGCAGCCGGTATCGCGCTGATCAATTCGGTCGGCA ACCTGGGCGGCTACATCGGGCCGTTCGTGATCGGTGCGTTGAAGGAAATCACCGGCAGCCTGGCATCGGGCCTCTATTTT CTGTCGGGCGTCATGGTCTTCGGGCTGCTGCTGACCGGCATCGTCTATCACGTGCTGGAGCGCAAGCATGTGCTGCCAGT GTCCGACTTCGCGGCGAGTGCCAAGGCGAGATAG Protein sequence : MSQELRLIRRITFKLIPFLILLYLIAYVDRSAVGFAKLHMGADIGIGDAAYGLGAGLFFIGYFLFEIPSNLMLERFGARR WFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYYITQWFPVRHRGKILGLFILSQPIAMMITGPVSGG LLGMDGILGLHGWQWLFIVIGTPAILLTWPVLRWLPDGPQQVKWMDQTEKDWLTGELKKDLEEYGQTRHGNPLHALKDKR VLLLALFYLPVTLSIYGLGLWLPTLIKQFGGSDLTTGFVSSVPYIFGIIGLLIVPRSSDRLNDRYGHLAVLYVLGAIGLF CSAWLTLPVAQLAALCVVAFALFSCTAVFWTLPGRFFAGASAAAGIALINSVGNLGGYIGPFVIGALKEITGSLASGLYF LSGVMVFGLLLTGIVYHVLERKHVLPVSDFAASAKAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-51 | 43 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-51 | 43 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-51 | 43 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-51 | 43 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-51 | 43 |
