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Name : nhaA (PSPPH_0347) Accession : YP_272650.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : pH-dependent sodium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3004 EC number : - Position : 394835 - 396010 bp Length : 1176 bp Strand : - Note : exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH DNA sequence : ATGACTCAAGTTTCCAACCGGGAAACGCCCAGAGGCGTTGCCGTCCTCAGCCGTTTCCTCGCCTCCGAATCAGCAGGCGG CATCGTCTTGATGGCGGCGGCGCTGGCCGCCCTTATCGTCGCCAACTCTTCTCTCTCAGCGAGCTACTTCTCGATTCTGC ACAGCGTCTGGCTGGGCCTGTCGGTGGAGCTGTGGATCAACGACGGGCTGATGGCCATCTTTTTTCTGATGGTCGGCCTG GAGATCAAGCGCGAAGTGCTGGCCGGCGGCCTGGCAACCTGGGGACAACGCGCCCTGCCCGGCTTTGCAGCGGCGGGCGG CATGCTGGTGCCTGCGCTGATCTACATCGCGATTAACTGGGGCAACCCGCAAACCCTCAGCGGCTGGGCGATTCCAGCGG CCACCGACATCGCCTTCGCCCTCGGCGTGCTGTCGCTGCTGGGCAATCGGGTGCCGACCTCGCTGAAAGTCTTTCTGGCC GCGCTGGCGATTCTCGATGACTTGGGTGCTGTAACCATCATCGCGTTTTTCTACAGCTCGGGGCTTAACCTGCCGATGCT GGCCGCCGCATTCGCGACCCTCGCCGTACTGATCGCGCTGAATCGCCTGAACGTCCGCCGCCTGCTGCCCTATTTGCTGC TCGGCGCACTGCTATGGTTCTTCGTCCTGCAATCGGGCGTACACGCCACGCTGGCCGGCGTGGCGCTGGCGCTGTGCATC CCGATGGGCAAGCCCGAGGAGGAAGCACGCTCGCCGCTGCTGTTTCTTGAAGAAAAAATGCATTACTGGGTGGCGTTCGC TGTGGTGCCGATCTTCGGCTTTGCCAATGCGGGTGTATCGCTTTCCGGCATCACCCTGGCAAACCTGATCGACCCGGTGC CTATGGGTGTCGCATTGGGCCTGTTCGTCGGCAAGCAGATCGGAGTGTTCCTTGCCGCAGTGCTGGCGATTCGTGCCGGG CTGGCGACATTGCCGGAAAACAGCAATTGGGTGCAGTTATACGGCGTCGCTATTCTGTGCGGCATCGGTTTTACCATGAG CCTGTTCATCGGCAACCTGGCGTTTCCTGGTTCGCAGCACCTGATCGATGAAGTAAAAGTCGGCGTGCTGATCGGCTCGG GCCTCGCGGCAATTGCCGGTATTTTGCTGCTGCGCACCCGTTTCAGCCGGCACTGA Protein sequence : MTQVSNRETPRGVAVLSRFLASESAGGIVLMAAALAALIVANSSLSASYFSILHSVWLGLSVELWINDGLMAIFFLMVGL EIKREVLAGGLATWGQRALPGFAAAGGMLVPALIYIAINWGNPQTLSGWAIPAATDIAFALGVLSLLGNRVPTSLKVFLA ALAILDDLGAVTIIAFFYSSGLNLPMLAAAFATLAVLIALNRLNVRRLLPYLLLGALLWFFVLQSGVHATLAGVALALCI PMGKPEEEARSPLLFLEEKMHYWVAFAVVPIFGFANAGVSLSGITLANLIDPVPMGVALGLFVGKQIGVFLAAVLAIRAG LATLPENSNWVQLYGVAILCGIGFTMSLFIGNLAFPGSQHLIDEVKVGVLIGSGLAAIAGILLLRTRFSRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nhaA1 | YP_001220808.1 | NahA family Na(+)/H(+) antiporter | Not tested | chp/tomA region | Protein | 9e-27 | 43 |
