Name : PSPPH_3329 (PSPPH_3329) Accession : YP_275487.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ISPsy2, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 3854414 - 3855394 bp Length : 981 bp Strand : + Note : identified by match to protein family HMM PF01609 DNA sequence : ATGAAACAGATGACCTTCGCCGACGCCGAGTATGCCGGCAAGCGCAAGCAGACCCGTAAGGAATTGTTCCTGATCGAGAT GGATCAGGTGGTGCCCTGGAAAGGTTTGATTGCCCTGATTGAGCCCTATTATCCAAAAGGAGAAGGTGGCCGGCCCGCCT ACCCACTGATGGCGATGCTGCGTGTTCATCTGATGCAGAACTGGTTCGGCTACAGCGATCCGGCGATGGAAGAAGCGCTG TATGAGACGACCATCCTGCGTCAGTTTTCAGGCCTGAGCCTGGAGCGCATTCCAGACGAAACCACGATTCTCAACTTCCG TCATCTGCTGGAAAAGCACGAGTTGGCGACCGGGATTCTCGGCGTAATTAATGGTTATCTGGGCGACCGTGGCTTGTCGT TGCGTCAAGGCACCATCGTCGATGCCACGCTGATCCACGCGCCCAGTTCGACCAAGAACAAGGATGGCAAACGCGATCCT GAGATGCATCAAACCAAGAAAGGTAACCAGTACTATTTCGGCGCCAAGGCTCACATCGGCGCCGACGACGAGTCAGGCCT GGTGCACAGCGTGGTAGTAACAGCGGCCAATGTGGCAGACGTCACGCAGGTTGCCAAACTGCTACACGGCGAGGAAAACG TAGTCTGCGCCGACGCAGGTTACACCGGGGTTGAGAAGCGCGAAGAACATGCTGGGCGCAAGGTCATTTGGCAGATTGCC GCCCGCCGCAGCACTTACAAAAAGCACGGAAAACGCAGTGTTTTGTACAAGGCGATCCGCAAAATCGAGAAGGCCAAGGC TCAGGTTCGCGCCAAGGTCGAGCATCCGTTTCGGGTCATCAAACGCCAGTTTGGCTATGAAAAAGTGCGCTTTCGGGGCT TGGCCAAGAACACCGCGCAGATGGTGACGTTGTTCGCCCTGTCAAACCTGTGGATGGCCCGCCGACATTTGTTGGCGAGC GCAGGAGAGGTGCGCGTGTAA Protein sequence : MKQMTFADAEYAGKRKQTRKELFLIEMDQVVPWKGLIALIEPYYPKGEGGRPAYPLMAMLRVHLMQNWFGYSDPAMEEAL YETTILRQFSGLSLERIPDETTILNFRHLLEKHELATGILGVINGYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDP EMHQTKKGNQYYFGAKAHIGADDESGLVHSVVVTAANVADVTQVAKLLHGEENVVCADAGYTGVEKREEHAGRKVIWQIA ARRSTYKKHGKRSVLYKAIRKIEKAKAQVRAKVEHPFRVIKRQFGYEKVRFRGLAKNTAQMVTLFALSNLWMARRHLLAS AGEVRV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 6e-139 | 93 |
tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 3e-98 | 81 |
PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 4e-98 | 81 |
unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 6e-67 | 62 |
tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 4e-58 | 50 |
tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 4e-58 | 50 |