Gene Information

Name : katB (PSPPH_3274)
Accession : YP_275434.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : catalase KatB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3794630 - 3796162 bp
Length : 1533 bp
Strand : +
Note : identified by similarity to SP:Q59635; match to protein family HMM PF00199

DNA sequence :
ATGCCGTTATTAAACTGGTCCAGACACATGGTGTGTTTGACTGCAGTCGGTCTCGTTACGGTTCCGACCGCCTATGCAGC
AGACACCCTGACCCGCGACAATGGTGCCGTCGTCGGCGACAATCAGAACTCTCAGACTGCAGGCGCCCAAGGGCCTGTCC
TGCTGCAAGATGTGCAGCTGTTGCAAAAGCTGCAGCGCTTTGATCGCGAGCGTATTCCGGAGCGCGTGGTCCACGCTCGC
GGCACGGGTGTCAAAGGTGAGTTCACCGCATCGGCCGATATCAGCGATCTGAGCAAGGCCACGGTGTTCAAATCGGGCGA
AAAAACCCCGGTCTTCGTGCGCTTTTCCTCCGTTGTCCATGGCAACCACTCGCCTGAAGCCCTGCGCGACCCACACGGCT
TCGCCACCAAGTTCTACACGGCAGACGGTAACTGGGACCTGGTAGGCAACAACTTTCCAACCTTCTTCATCCGTGACGCC
ATCAAGTTCCCGGACATGGTCCACGCCTTCAAGCCTGACCCGCGTACCAACCTGGACAACGATTCGCGTCGCTTTGACTT
CTTCTCGCATGTTCCAGAAGCCACACGTACGCTGACACTGCTGTATTCAAATGAGGGTACACCTGCAGGCTATCGCTTCA
TGGACGGCAACGGCGTACACGCCTACAAACTGGTGAATGCCAAAGGCGAAGTGCACTACGTCAAGTTCCACTGGAAGACC
CTGCAAGGCATCAAGAACCTTGATCCGAAAGAAGTCGCTCAGGTCCAGTCCAAGGACTACAGCCATCTGACCAACGATCT
GGTCGGTGCCATCAAAAAAGGCGACTTCCCGAAATGGGACTTGTACGTTCAGGTCCTGAAGCCTGAAGAGCTGTCGAAAT
TCGACTTCGACCCTCTGGACGCCACCAAGATCTGGCCTGATGTCCCTGAGAAGAAAATCGGTCAGATGGTCTTGAACAAG
AACGTCGACAACTTCTTCCAGGAAACCGAACAGGTCGCCATGGCCCCGGCTAACCTGGTTCCTGGTATCGAGCCTTCCGA
GGACCGTCTGCTGCAAGGCCGTGTGTTCTCCTACGCCGACACCCAGATGTATCGCCTGGGCGCGAATGGTCTGAGCCTGC
CGGTCAACCAGCCCAAGGTTGCGGTGAACAATGGTAATCAGGACGGTGCTCTGAATACCGGTCACACCACCAGCGGCGTC
AACTATGAGCCGAGCCGTCTGGAGCCACGTCCAGCCGACGAAAAAGCGCGCTACAGCGAACTGCCGATCAGCGGCACCAC
CCAGCAGGCGAAGATCACGCGTGAGCAGAACTTCAAGCAGGCGGGTGATCTGTATCGCTCCTACAGCCCTAAAGAGAAGA
CCGACCTGGTACAGAGTTTTGGCGAGTCGCTGGCTGACACCGACACCGAAAGCAAGAACATTATGCTGTCGTTCCTGTAC
AAGGCAGATCCGGACTACGGCACTCGGGTAACCGAAGTCGCCAAGGGCGATCTGAGCAAGGTCAAGTCGCTGGCTGCAAG
CCTCAAAGACTGA

Protein sequence :
MPLLNWSRHMVCLTAVGLVTVPTAYAADTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHAR
GTGVKGEFTASADISDLSKATVFKSGEKTPVFVRFSSVVHGNHSPEALRDPHGFATKFYTADGNWDLVGNNFPTFFIRDA
IKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKT
LQGIKNLDPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPEELSKFDFDPLDATKIWPDVPEKKIGQMVLNK
NVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGANGLSLPVNQPKVAVNNGNQDGALNTGHTTSGV
NYEPSRLEPRPADEKARYSELPISGTTQQAKITREQNFKQAGDLYRSYSPKEKTDLVQSFGESLADTDTESKNIMLSFLY
KADPDYGTRVTEVAKGDLSKVKSLAASLKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 5e-79 42