Gene Information

Name : PSPPH_3140 (PSPPH_3140)
Accession : YP_275305.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0399
EC number : 4.2.1.-
Position : 3642398 - 3643519 bp
Length : 1122 bp
Strand : +
Note : identified by match to protein family HMM PF01041

DNA sequence :
ATGATTAATGTGACCAAGACTTATCTGGGTGATATCGACCAGTTCAAACGCTACGTTGAAGGTATCTACGCCCGCGGCTG
GCTGACCAATCACGGCCCGCTGGCCAAGGATCTGACGGACCGGCTCAAGGACTATCTGGGCGTCAAACACATTATTCTGA
CCAATAATGGCACCCTGGCCCTGCAGATTGCCTATCGGGCTCTGGGCTTGAGTGGCAGCGCTGTTACAACGCCATTCAGT
TTCGTCGCCACCAGCAGCTCGCTGCAATGGGAAGGTATTCGCCCGGTCTTTGCCGATATTGATCCGGACACCTGGAATAT
CTCGCCACAGCACATCAAACGCAGCATCGCCGAAGACACTACGGCAATCGTGGGCACCCATGTGTTCGGCAATCCTTGCG
ACGTAGAAGCCATTCAGCAGATTGCCCGCGAACATAAGCTCAAGGTGATCTATGACGGCGCACATGCATTTGCCGTGCGT
CATGCCGGCCAGTCGGTGCTCAATCATGGCGATATCAGCACCCTGAGCTTTCATGCCACCAAACTATTCCACACGATTGA
AGGCGGCGCGATCATCACCAACGACGACGAACTGGCCAGAAGCGCCCACCTGATGTGCAACTTTGGCATATCGGGAGTAG
ACCGAATCGACGGCATCGGCATCAATGCCAAGCTCAACGAATTCTCCGCAGCCATGGGGCTATGCATTCTCGACAACATA
GGCAACATCCTTGAAGAGCGCGCGCAAATCGCTCACCGCTATACGTCAGCGCTGGAAAGCTACCTGGATCTGCAAAAACC
CCAGGCCGACAGCGAACTCAATAACAGCTATTACCCGGTGGCGCTGCGTAACGAGCAACAGCTGTTGACGGTGCGCACCG
CGCTCAACCTGCGCAAGATCAACCCTCGCCGCTATTTTTACCCCTCACTGGACACCCTTGAATACCTGCAGCCACAGCCC
GGCCAGCCTGTGTCCAGAGCATTGAGCGAACGAGTGCTGTGCCTGCCGATCTATCCCGGCCTGCTGAAAAGCGAGCAGGA
CCTGGTCATACGCACGCTGATCGAAACCTGTGCTGTGACTGATATGGACTACCCGGCTTGCTCCGCTGCCAGGGTCTGCT
GA

Protein sequence :
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLAKDLTDRLKDYLGVKHIILTNNGTLALQIAYRALGLSGSAVTTPFS
FVATSSSLQWEGIRPVFADIDPDTWNISPQHIKRSIAEDTTAIVGTHVFGNPCDVEAIQQIAREHKLKVIYDGAHAFAVR
HAGQSVLNHGDISTLSFHATKLFHTIEGGAIITNDDELARSAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
GNILEERAQIAHRYTSALESYLDLQKPQADSELNNSYYPVALRNEQQLLTVRTALNLRKINPRRYFYPSLDTLEYLQPQP
GQPVSRALSERVLCLPIYPGLLKSEQDLVIRTLIETCAVTDMDYPACSAARVC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15326.1 unknown Not tested Not named Protein 9e-67 46