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Name : amt1 (PSPPH_2912) Accession : YP_275094.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 3383006 - 3384331 bp Length : 1326 bp Strand : - Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGGTCAATCGTCTACACGGCAAATCCCTTACAGCTTTACTCGCGCCAGGCGCCTTCGCTCCGATTGCGCAGGCAGCTGA CGCCCCCGTTTTGAACACCGGCAGCACGGCGTGGATGATCACCGCAGCAGTGCTGGTGCTGTTCATGTGCCTTCCGGGGC TGGCGCTGTTTTACGGCGGGCTGGTACGGGCCAAGAACATGTTGTCGCTGTTCACTCAGTGCTTCGGCATTGCCGGAGTG GTCGGCGTGCTGTGGGTCATCTACGGGTACAGCATGGTAGTGGATACCAGCAACATGGTCGAAGGGCAGGTGAGCTTCAA CAGCTTTGTCGGCGGACTGAGCCGCGCGTTTCTGGCCGGCATGACCCCCGACAGTCTGGTCGGTGACATTCCGGAAGGCG TGTTTGTGACCTTCCAGATGACCTTCGCCATTATCACGCCTGCGCTGATTGCCGGAGCCTTTGCCGCACGCATGAAATTC TCGGCCGCGCTGCTGTTCATGGCGCTCTGGTTTACGCTGGTGTATGCGCCGGTCGCGCATATGGTCTGGGGCGGGGCAGG TGCACTGATGCATAACTGGGGCGTGCTGGACTTTGCTGGTGGCACCGCTGTGCACATCAATGCCGGTGTCGCGGCACTGG CGGCGTGTCTGGTGCTGGGCAAACGCAAGGGCTATCAGAATACCCCGATGCCTGCGCACAACCTGAGCCTGACCATGGCT GGCGCGGCGATGCTCTGGGTCGGCTGGTTTGGTTTCAATATCGGCTCTGGTGGCGGCCTGAACGGCACTTCCGGCATCGT CATGCTCAACACGCAAGTGGGGGCCTGCGCCGGGATACTCGGCTGGATGTTCACCGAGTGGTTCAAGGTCGGCAAACCCA GCGCGCTGGGTCTGGCAAGCGGCGCGCTGGCGGGGCTGGTCGGCATTACGCCTGCCTGTGCCTATGTCGGCGTCGGCGGG GCACTGGCGATTGGCGTGCTGTGCGGGGTGTTCTGCTACCTGAGCGTGACCGTGCTGAAAAAACGCCTGGGTTATGACGA CAGCCTCGACGTGTTCGGCCTGCACGGCATCGGCGGCATGATCGGCGCAGTGCTGACCGGCGTGTTCTGCGTGCCCTCAC TGGGCGGGCTGGTGCCGGATGTCAGCATGGGAGCTCAGGTAATTGCCCAGATCAAAGGCGTGCTGTTCACCACGGTATAT TGCTTCGCAGTCAGCTGGATCATCCTCAAGGCCGTGCAGGCACTGATCGGCCTGCGTGCGCATGAATCAGTGGAAGAGAT GGGGCTGGATCTGGCCGAGCATAACGAGCGGGCTTATAACCATTGA Protein sequence : MVNRLHGKSLTALLAPGAFAPIAQAADAPVLNTGSTAWMITAAVLVLFMCLPGLALFYGGLVRAKNMLSLFTQCFGIAGV VGVLWVIYGYSMVVDTSNMVEGQVSFNSFVGGLSRAFLAGMTPDSLVGDIPEGVFVTFQMTFAIITPALIAGAFAARMKF SAALLFMALWFTLVYAPVAHMVWGGAGALMHNWGVLDFAGGTAVHINAGVAALAACLVLGKRKGYQNTPMPAHNLSLTMA GAAMLWVGWFGFNIGSGGGLNGTSGIVMLNTQVGACAGILGWMFTEWFKVGKPSALGLASGALAGLVGITPACAYVGVGG ALAIGVLCGVFCYLSVTVLKKRLGYDDSLDVFGLHGIGGMIGAVLTGVFCVPSLGGLVPDVSMGAQVIAQIKGVLFTTVY CFAVSWIILKAVQALIGLRAHESVEEMGLDLAEHNERAYNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 2e-60 | 49 |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 2e-60 | 49 |
