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Name : PSPPH_2896 (PSPPH_2896) Accession : YP_275078.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3348874 - 3350619 bp Length : 1746 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGATTTCCAGTCTGATACGCGCGGGCGAACGCCTTGCAGGGCAACGCGATCCACGCCTGAATCAGGGGCTGCGCCTTGC GGTACTTGAAGGTTTGCTCAGCGCTGCACCTTACCTGCTGCTGTACTGGCTGCTGGCAAGCCTGTTCGAGGATACGCTTC AGGGCTGGAGCGTTGTCTGGCTGGCGCTGGGCATGCTCGCCTGTCTGGCAGCGCGAATCACCGTAGGAGCCCTTGGCACA CCACTGATATTCACCGGTGCCTACGCGATGATGGCCAATGCCCGCCTGCGTCTGGTCGACCATCTGCAGAAACTTCCGCT CGGCTGGTTCGCGACCACCAACAGCGGCGAAATCAGCGCTCAGGTGACCAGCGATCTGGCCATGGTCGAGCATCTGTGGT CGCACTTTCTCGGTGTGTTCGCCCTATCGCTGGCCGAGCTTGGGTTTATTCTACTGCTGCTGTTCTGGCTGGAGCCCGTC CTCGCCTGCACGGTGCTGGTCATGCTGCCGCTGGCAGCGCTGGCGATCCATGTGGCGATCCGCAAAACGCTGCGGCACGC CGATCACATGCTGATCACCAGCAACCGCACTCAGGCAGCGCTGCAGGAATACATTCAGGGCATTGCGGTGATCCGCAGCT TCGGCCGCTTCGGCAGCGCTTTGCAGCGCTTGAATCGAGCGCTGGACGAGCAACACAGCGCCATGGTCAGCATCGAACTG AAACCAGCAGTATGGGTCGGTCTGTTCGGCCTGGTCATCGAGGCCGGCTTCATCCTTATGGTTCTGCTGGGTTGCGACCT GCTGCTCAACGGGCAGATGAGCATCCAGCACCTGATTATCTTCACCGTGCTGGCCTGGCCGCTGTACCGCAAGAGCATCG ACCTGGGGTTCTCGGTTCTGCTGTTGCGCTTCGGCCATCGCGCGCTATCGCGCACCGAGCAGCTGCTGAACCAGCAACCG ATGCCAGAGCCTGCCCGGCCGCGCAGCCCCGAGCACTTCGATATCGAACTCAGGAATGTACGTTTCAGCTACGCCGAACG CGAAGCGCCGGTTATCAAGGGGCTTTCCTGTCACCTTGCCGCTGGCACCCTGACAGCGCTGGTCGGCCCCAGCGGCGCGG GTAAAAGTACCCTGGCGCATCTGGTCGCCCGACTCTGGGACATCGACAGCGGTCAGTTACGGATTGGCGGCATCGAGGCG CGCGATATCGACAGCAACTACCTGCAAAAGCACATCTCGATGGTCTTTCAGGACGTCACGCTGTTCTCCGGCACAGTGCT CGACAACCTGCTGGTCGGCAAGCCCGATGCAAGCGAGCAGGAGGTCATTCACGCAGCATGCCAAGCCCACGCCCACACGT TCATCGAGGCGCTGCCCGATGGCTATGCCACGCGAATCGGCGAGGGTGGCGGCTGGCTGTCGGGAGGTGAGCGGCAACGC CTTTCCATCGCCCGGGCGCTGCTCAAGAACAGCCCGATCCTGCTGCTCGACGAAGCCACCTCAAGCGTCGATCCGTCTTC GGAAGCCGCCATCCAAAGGGGTCTGGATGCGCTGGTGCGTGATCGCACGGTACTGGTCATCGCCCATCGTCTGCACAACA TCCAGCACGCCGACCAGATTCTGGTCATGGATCGCGGACGCATCGTAGAACAGGGCCGCCACGATGAGCTGTTGGCGCGC CAAGGGCTCTACGCCCGCCTGTGGAACCGGCAGAGCCAGGCACGGAACTGGCACTTGCACACTTGA Protein sequence : MISSLIRAGERLAGQRDPRLNQGLRLAVLEGLLSAAPYLLLYWLLASLFEDTLQGWSVVWLALGMLACLAARITVGALGT PLIFTGAYAMMANARLRLVDHLQKLPLGWFATTNSGEISAQVTSDLAMVEHLWSHFLGVFALSLAELGFILLLLFWLEPV LACTVLVMLPLAALAIHVAIRKTLRHADHMLITSNRTQAALQEYIQGIAVIRSFGRFGSALQRLNRALDEQHSAMVSIEL KPAVWVGLFGLVIEAGFILMVLLGCDLLLNGQMSIQHLIIFTVLAWPLYRKSIDLGFSVLLLRFGHRALSRTEQLLNQQP MPEPARPRSPEHFDIELRNVRFSYAEREAPVIKGLSCHLAAGTLTALVGPSGAGKSTLAHLVARLWDIDSGQLRIGGIEA RDIDSNYLQKHISMVFQDVTLFSGTVLDNLLVGKPDASEQEVIHAACQAHAHTFIEALPDGYATRIGEGGGWLSGGERQR LSIARALLKNSPILLLDEATSSVDPSSEAAIQRGLDALVRDRTVLVIAHRLHNIQHADQILVMDRGRIVEQGRHDELLAR QGLYARLWNRQSQARNWHLHT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nrpB | YP_002152322.1 | siderophore ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 8e-112 | 46 |
