Gene Information

Name : PSPPH_0282 (PSPPH_0282)
Accession : YP_272587.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 326114 - 326878 bp
Length : 765 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGCCTCTGCTTAGAATTTCCGCCCTGCATAAATACTATGGCGATCATCACGTACTCAAAGGCATCGATCTGTCGGTCGA
AGAGGGCCAGGTCGTGGCAATCATTGGTCGCAGCGGCTCGGGCAAAAGCACCCTGTTGCGCACGCTCAACGGCCTGGAGT
CGATCAACGATGGTGTGATCGAGGTCGATGGCGAATATCTGGACGCCGCACGCGCCGATCTGCGCACCCTGCGTCAGAAG
GTCGGCATGGTGTTTCAGCAGTTCAACCTGTTCCCGCATCTGAGCGTGGGCGAGAACGTGATGCTCGCCCCGCAGGTCGT
GCAGAAGGTGCCCAAGGCCGAAGCGGCAAAGCTGGCGAGAAAGATGCTGGAGCGCGTCGGGCTGGGCGAGAAGTTCGACG
CCTTCCCGGATCGCCTGTCCGGTGGCCAGCAGCAACGCGTGGCGATTGCCCGCGCACTGGCGATGTCGCCCAAGGTGTTG
CTGTGCGACGAAATCACCTCGGCGCTGGACCCGGAGCTGGTCAACGAAGTGCTCAGCGTGGTGCGCCAGCTGGCTGCCGA
CGGCATGACCCTGATCATGGTGACCCACGAAATGCGCTTCGCCCGTGAAGTGGGCGACAAGCTGGTGTTCATGCACCAGG
GCAAGGTGCATGAAGTGGGCGACCCGAAAGTACTCTTCGCCAACCCGAAAACCCCGGAACTGGCGAACTTCATCGGCACC
GTGGAGCACGCCTGGCAAGAGCCGACGCAGAGCGTCGCACGATAG

Protein sequence :
MPLLRISALHKYYGDHHVLKGIDLSVEEGQVVAIIGRSGSGKSTLLRTLNGLESINDGVIEVDGEYLDAARADLRTLRQK
VGMVFQQFNLFPHLSVGENVMLAPQVVQKVPKAEAAKLARKMLERVGLGEKFDAFPDRLSGGQQQRVAIARALAMSPKVL
LCDEITSALDPELVNEVLSVVRQLAADGMTLIMVTHEMRFAREVGDKLVFMHQGKVHEVGDPKVLFANPKTPELANFIGT
VEHAWQEPTQSVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_0282 YP_272587.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-27 42