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Name : PSPPH_2645 (PSPPH_2645) Accession : YP_274836.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : short chain dehydrogenase/reductase oxidoreductase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 3060177 - 3060923 bp Length : 747 bp Strand : + Note : identified by match to protein family HMM PF00106 DNA sequence : ATGGAAAAAGTCCTCATTATTACCGGTGGCTCGCGCGGAATCGGCGCAGCCACTGCGCGTCTGGCCGCTGTACAGGGCTA TCGGATCTGTATCAATTATCTGTCTGACCATGCCGCAGCCGAAAAGACGGCAGGGCAGGTCAGGGCCCTGGGTGCTCAGG CGATCACCTTGCAGGCGGACGTCAGCAACGAAGACGAGATCATGCGCCTGTTCTCCAGGGTCGATTCGGAACTCGGCCGC GTTACCCATCTGGTCAACAATGCAGGCACGCTCGCTCAGGCTTCAAGAGTCGAGGACATGTCCGAATTCCGAATGCTCAA AATGATGATGACCAACGTCGTCGGACCGATGCTGTGCAGCAAACATGCCTTGTTACGCATGCTGCCGAGTCACGGCGGGC ACGGTGGCAGTATCGTCAACGTATCCTCGCTCGCGGCCCGCCTGGGCTCGGCGGGCGAATATGTGGATTACGCCGCTTCG AAAGGCGCGCTGGACACGTTCACCATCGGGCTTTCCAGGGAAGTGGCCGGGGAGAACATTGGCGTCAACGCGGTGCGGCC GGGGTTCATCTTCACCGACTTTCACGCCCTGAGCGGCGATCCGTTCCGCGTCAGCAAACTCGAGGGCGCACTGCCCATGG GCCGTGGGGGTACGGCGGAGGAAGTGGCCGAGGCCATTCTCTGGCTGCTGTCGGACAATGCGTCGTATGCCACAGGAACG TTTATCGATCTGGCGGGCGGGCGCTGA Protein sequence : MEKVLIITGGSRGIGAATARLAAVQGYRICINYLSDHAAAEKTAGQVRALGAQAITLQADVSNEDEIMRLFSRVDSELGR VTHLVNNAGTLAQASRVEDMSEFRMLKMMMTNVVGPMLCSKHALLRMLPSHGGHGGSIVNVSSLAARLGSAGEYVDYAAS KGALDTFTIGLSREVAGENIGVNAVRPGFIFTDFHALSGDPFRVSKLEGALPMGRGGTAEEVAEAILWLLSDNASYATGT FIDLAGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 2e-56 | 58 |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 5e-60 | 55 |
