Gene Information

Name : tpx (PSPPH_2639)
Accession : YP_274830.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 3048162 - 3048662 bp
Length : 501 bp
Strand : +
Note : identified by similarity to SP:P37901; match to protein family HMM PF00578

DNA sequence : 
ATGGCTCAAGTAACCCTCAAAGGCGGCCCTGTTCAAGTCAATGGCAAGCTGCCTGAAGTCGGCAGCAAGGCACCTGCCTT
CACACTGGTGGGTGAAGGTCTTGTCGACAAGACCCTGGCTGACTTCGCTGGCAAGCGCAAGGTGCTGAACATTTTTCCGA
GCGTCGATACACCGACCTGTGCAACGTCGGTACGCAAGTTCAACGCCCAGGCAAACGAGCTGAGCAATGCCGTTGTTCTG
TGTATCTCTGCTGATCTGCCGTTTGCCCAGTCCCGCTTCTGCGGCTCCGAAGGTCTGGAAAACGTCAAAAACCTGTCTTC
TTTCCGCGCTGCCGATTTCAGCGAGCATTACGGCGTTGCAATTGCAGACGGTCCACTGAAAGGTCTGACCGCTCGTGCGG
TGGTTGTTCTGGACGAAAACGACAAAGTGCTGCACAGCGAATTGGTATCAGAGATCGCTAACGAACCCGACTACGACGCT
GCATTGGCTGTGCTTAAGTAA

Protein sequence : 
MAQVTLKGGPVQVNGKLPEVGSKAPAFTLVGEGLVDKTLADFAGKRKVLNIFPSVDTPTCATSVRKFNAQANELSNAVVL
CISADLPFAQSRFCGSEGLENVKNLSSFRAADFSEHYGVAIADGPLKGLTARAVVVLDENDKVLHSELVSEIANEPDYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-37 50
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-37 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-37 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-37 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_274830.1 thiol peroxidase VFG0087 Protein 7e-38 50